RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 SERGEFQ9UGK8 458 aa15.33■□□□□ 0.04
RPUSD3-208ENST00000433972 XPO7Q9UIA9 1087 aaKnown RBP15.33■□□□□ 0.04
RPUSD3-208ENST00000433972 DNAJC12Q9UKB3 198 aa15.33■□□□□ 0.04
RPUSD3-208ENST00000433972 FARP1Q9Y4F1 1045 aaPredicted RBP15.33■□□□□ 0.04
RPUSD3-208ENST00000433972 PCDHGA1Q9Y5H4 931 aa15.33■□□□□ 0.04
RPUSD3-208ENST00000433972 IGF2RP11717 2491 aa15.33■□□□□ 0.04
RPUSD3-208ENST00000433972 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 GOLGA8CPA6NN73 597 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 ALOX15BO15296 676 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 CLDN11O75508 207 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 ITGAVP06756 1048 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 PDGFRAP16234 1089 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 CTSOP43234 321 aaPredicted RBP15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 BPIFB4P59827 614 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 OVGP1Q12889 678 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 ZNF177Q13360 481 aaPredicted RBP15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 EIF4EBP2Q13542 120 aaPredicted RBP15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 NCAPHQ15003 741 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 NFKBIBQ15653 356 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 ZSCAN23Q3MJ62 389 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 PRPF39Q86UA1 669 aaKnown RBP15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 APCDD1Q8J025 514 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 DEFB106AQ8N104 65 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 STK40Q8N2I9 435 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 C1orf131Q8NDD1 294 aaKnown RBP15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 SHC3Q92529 594 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 PTPRN2Q92932 1015 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 SERAC1Q96JX3 654 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 RPL10LQ96L21 214 aaKnown RBP15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 CCDC114Q96M63 670 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 FAM129BQ96TA1 746 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 PRMT1Q99873 361 aaKnown RBP15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 DKK4Q9UBT3 224 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 CYTH4Q9UIA0 394 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 SLCO3A1Q9UIG8 710 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 DMTF1Q9Y222 760 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 BTBD3Q9Y2F9 522 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 SLCO1B1Q9Y6L6 691 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 ZZEF1O43149 2961 aa15.32■□□□□ 0.04
RPUSD3-208ENST00000433972 FAM208BQ5VWN6 2430 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 SYNJ2BP-COX16A0A087WUM0 186 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3DA0A087WVF3 549 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3IA0A087WXS9 549 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3EA0A087X179 549 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3KA0A087X1G2 549 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3FA6NER0 549 aaPredicted RBP15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3LB9A6J9 549 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 CAPNS1P04632 268 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 C1SP09871 688 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3HP0C7X1 549 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 ZNF18P17022 549 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 NOS2P35228 1153 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 KRT83P78385 493 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 UBXN1Q04323 297 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 SMAD1Q15797 465 aaKnown RBP15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 ACCSLQ4AC99 568 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3GQ6DHY5 549 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 OR6B2Q6IFH4 312 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3CQ6IPX1 549 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 NAPEPLDQ6IQ20 393 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 LAYNQ6UX15 382 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 IQCHQ86VS3 1027 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 TBC1D3Q8IZP1 549 aaPredicted RBP15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 AADATQ8N5Z0 425 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 CPXM1Q96SM3 734 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 FUCA2Q9BTY2 467 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 ERVMER34-1Q9H9K5 563 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 PLCB1Q9NQ66 1216 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 COX16Q9P0S2 106 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 STAP1Q9ULZ2 295 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 DAAM1Q9Y4D1 1078 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 FREM2Q5SZK8 3169 aa15.31■□□□□ 0.04
RPUSD3-208ENST00000433972 KCNK3O14649 394 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 ATP9BO43861 1147 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 DAB1O75553 588 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 LDOC1O95751 146 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 F9P00740 461 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 HNF1BP35680 557 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 STK19P49842 368 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 KCNMA1Q12791 1236 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 NME3Q13232 169 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 AUHQ13825 339 aaKnown RBP15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 RAPGEF1Q13905 1077 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 BRMS1LQ5PSV4 323 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 KLHDC7AQ5VTJ3 777 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 CXorf57Q6NSI4 855 aaKnown RBP15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 FBXL22Q6P050 247 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 GJB7Q6PEY0 223 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 SLC26A9Q7LBE3 791 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 TMPRSS12Q86WS5 348 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 PASD1Q8IV76 773 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 PDCD7Q8N8D1 485 aaKnown RBP15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 MFSD2AQ8NA29 543 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 ZNF397Q8NF99 534 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 C2orf49Q9BVC5 232 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 PDCL3Q9H2J4 239 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 VPS28Q9UK41 221 aa15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 RALYQ9UKM9 306 aaKnown RBP15.3■□□□□ 0.04
RPUSD3-208ENST00000433972 LGALS16A8MUM7 142 aa15.29■□□□□ 0.04
RPUSD3-208ENST00000433972 TLR4O00206 839 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms