RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 ABHD2P08910 425 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 HNRNPA1P09651 372 aaKnown RBP eCLIP10.82□□□□□ -0.68
NEFM-202ENST00000433454 CCNB1P14635 433 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 PBX2P40425 430 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 EPHA5P54756 1037 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 ANO4Q32M45 955 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 BBS9Q3SYG4 887 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 ELMSAN1Q6PJG2 1045 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 PYROXD1Q8WU10 500 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 MYEOVQ96EZ4 313 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 TEKT5Q96M29 485 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 PRICKLE1Q96MT3 831 aaPredicted RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 PBX4Q9BYU1 374 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 XAB2Q9HCS7 855 aaKnown RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 RSPH14Q9UHP6 348 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 IPO11Q9UI26 975 aaKnown RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 STOML2Q9UJZ1 356 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 ZFP37Q9Y6Q3 630 aaPredicted RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 F5H423 210 aaPredicted RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 TRANK1O15050 2925 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 MATN3O15232 486 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 JCHAINP01591 159 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 PTPN2P17706 415 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 CDH4P55283 916 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 YBEYP58557 167 aaPredicted RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 SLC7A9P82251 487 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 POLD3Q15054 466 aaPredicted RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 KRT71Q3SY84 523 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 MSS51Q4VC12 460 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 HP1BP3Q5SSJ5 553 aaPredicted RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 TTC39BQ5VTQ0 682 aaPredicted RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 CROCCP2Q86T23 111 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 CFAP52Q8N1V2 620 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 LEMD2Q8NC56 503 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 UHMK1Q8TAS1 419 aaKnown RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 HMCESQ96FZ2 354 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 CERS4Q9HA82 394 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 SP110Q9HB58 689 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 HCFC1R1Q9NWW0 138 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 MSRAQ9UJ68 235 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 LSM7Q9UK45 103 aaKnown RBP10.82□□□□□ -0.68
NEFM-202ENST00000433454 HCFC2Q9Y5Z7 792 aa10.82□□□□□ -0.68
NEFM-202ENST00000433454 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 PER2O15055 1255 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 RRP9O43818 475 aaKnown RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 CLDN11O75508 207 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 BANF1O75531 89 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 GJA1P17302 382 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 RPS24P62847 133 aaKnown RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 MTM1Q13496 603 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 RAB30Q15771 203 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 DNAJC21Q5F1R6 531 aaKnown RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 COL13A1Q5TAT6 717 aaPredicted RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 PPP2R2DQ66LE6 453 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 CHST9Q7L1S5 443 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 ZNF354CQ86Y25 554 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 ANKMY2Q8IV38 441 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 PDCD7Q8N8D1 485 aaKnown RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 ATP11CQ8NB49 1132 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 ZSCAN18Q8TBC5 510 aaPredicted RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 ADAMTS19Q8TE59 1207 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 FATE1Q969F0 183 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 WBP2Q969T9 261 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 ZDHHC7Q9NXF8 308 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 A0A1B0GVM2 712 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 TCAF2A6NFQ2 919 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 NEBLO76041 1014 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 NFKB1P19838 968 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 DDX6P26196 483 aaKnown RBP eCLIP10.81□□□□□ -0.68
NEFM-202ENST00000433454 CD68P34810 354 aaPredicted RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 CCR2P41597 374 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 CBLBQ13191 982 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 CCDC38Q502W7 563 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 STXBP5Q5T5C0 1151 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 Q6ZNB5 142 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 CAND1Q86VP6 1230 aaKnown RBP10.81□□□□□ -0.68
NEFM-202ENST00000433454 FBXO36Q8NEA4 188 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 SHKBP1Q8TBC3 707 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 IL12RB2Q99665 862 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 CENPHQ9H3R5 247 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 VPS37BQ9H9H4 285 aa10.81□□□□□ -0.68
NEFM-202ENST00000433454 PDE4DIPQ5VU43 2346 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 A0A087WUV0 522 aaPredicted RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 TYW5A2RUC4 315 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 GOLGA6CA6NDK9 693 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ERI2A8K979 691 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 TRDMT1O14717 391 aaKnown RBP10.8□□□□□ -0.68
NEFM-202ENST00000433454 GREM1O60565 184 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 IVLP07476 585 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 RHOP08100 348 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 GOLGA6DP0CG33 693 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 PHBP35232 272 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 MAGEA3P43357 314 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ZXDBP98169 803 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 PRPSAP1Q14558 356 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 ARHGAP15Q53QZ3 475 aa10.8□□□□□ -0.68
NEFM-202ENST00000433454 TTMPQ5BVD1 217 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms