RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 SCD5Q86SK9 330 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 GALNT15Q8N3T1 639 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 IRGQQ8WZA9 623 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 APOL2Q9BQE5 337 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 TSEN34Q9BSV6 310 aaKnown RBP8.52□□□□□ -1.04
HDAC9-212ENST00000432645 PITPNM3Q9BZ71 974 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 PPCSQ9HAB8 311 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 PCDH10Q9P2E7 1040 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 CROTQ9UKG9 612 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 SMG5Q9UPR3 1016 aaKnown RBP8.52□□□□□ -1.04
HDAC9-212ENST00000432645 TRIM17Q9Y577 477 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 PCDHB7Q9Y5E2 793 aa8.52□□□□□ -1.04
HDAC9-212ENST00000432645 IQANK1A0A1B0GTG1 560 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 TRIM49D1C9J1S8 452 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 PAGE1O75459 146 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 C1QAP02745 245 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 CCDC159P0C7I6 412 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 ALOX15P16050 662 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 FDFT1P37268 417 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 SCTRP47872 440 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 AIF1P55008 147 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 CCL23P55773 120 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 ZBTB17Q13105 803 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 TCTN1Q2MV58 587 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 MROH9Q5TGP6 573 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 ARHGAP36Q6ZRI8 547 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 PDZD4Q76G19 769 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 SLC26A11Q86WA9 606 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 LRRC49Q8IUZ0 686 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 STAMBPL1Q96FJ0 436 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 FRMD8Q9BZ67 464 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 UNC93B1Q9H1C4 597 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 XAB2Q9HCS7 855 aaKnown RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 ABCC13Q9NSE7 274 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 COMMD8Q9NX08 183 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 TUBA8Q9NY65 449 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 RRN3Q9NYV6 651 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 ZMAT5Q9UDW3 170 aaKnown RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 FETUBQ9UGM5 382 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 ARHGEF37A1IGU5 675 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 IRAK2O43187 625 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 LPXNO60711 386 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 SPAG6O75602 509 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 SMNDC1O75940 238 aaKnown RBP eCLIP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 OAZ2O95190 189 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 TBX18O95935 607 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 JCHAINP01591 159 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 F7P08709 466 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 CDC25CP30307 473 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 RASA2Q15283 850 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 PARP6Q2NL67 630 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 FAM133BQ5BKY9 247 aaKnown RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 TMEM173Q86WV6 379 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 SLC7A5P1Q8MH63 180 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 SLAIN1Q8ND83 568 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 OR52K1Q8NGK4 314 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 GSDMBQ8TAX9 411 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 FCRL2Q96LA5 508 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-212ENST00000432645 SLC13A1Q9BZW2 595 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 ZCWPW1Q9H0M4 648 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 NDFIP2Q9NV92 336 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 TMEM161AQ9NX61 479 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 MPP6Q9NZW5 540 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 ADAM28Q9UKQ2 775 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 LRFN2Q9ULH4 789 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 PHF24Q9UPV7 400 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 TSC2P49815 1807 aa8.52□□□□□ -1.05
HDAC9-212ENST00000432645 SDR42E2A6NKP2 422 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 INPPL1O15357 1258 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 UPP2O95045 317 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 TSHRP16473 764 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 GARSP41250 739 aaKnown RBP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 PHEXP78562 749 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 MTFR1Q15390 333 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 ACCSLQ4AC99 568 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 CGB2Q6NT52 195 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 BANPQ8N9N5 519 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 DNAAF3Q8N9W5 541 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 CCDC63Q8NA47 563 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 DEFB118Q96PH6 123 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 FAM111AQ96PZ2 611 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 FTHL17Q9BXU8 183 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 PNPLA8Q9NP80 782 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 ABCF3Q9NUQ8 709 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 SYBUQ9NX95 663 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 KANSL3Q9P2N6 904 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 USP15Q9Y4E8 981 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 SF3B1O75533 1304 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 CCDC78A2IDD5 438 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 FKTNO75072 461 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 ALDH2P05091 517 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 CPB1P15086 417 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 CCR1P32246 355 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 CD68P34810 354 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 HCAR3P49019 387 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 NEK2P51955 445 aa8.51□□□□□ -1.05
HDAC9-212ENST00000432645 PPIDQ08752 370 aaKnown RBP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 YTHDF3Q7Z739 585 aaKnown RBP8.51□□□□□ -1.05
HDAC9-212ENST00000432645 DEFB128Q7Z7B8 93 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms