RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 STRADAQ7RTN6 431 aa15.33■□□□□ 0.05
LINC00839-202ENST00000429940 SNX32Q86XE0 403 aa15.33■□□□□ 0.05
LINC00839-202ENST00000429940 IFNLR1Q8IU57 520 aaPredicted RBP15.33■□□□□ 0.05
LINC00839-202ENST00000429940 EGFL6Q8IUX8 553 aa15.33■□□□□ 0.05
LINC00839-202ENST00000429940 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.33■□□□□ 0.05
LINC00839-202ENST00000429940 EZH1Q92800 747 aaPredicted RBP15.33■□□□□ 0.05
LINC00839-202ENST00000429940 NMD3Q96D46 503 aaKnown RBP15.33■□□□□ 0.05
LINC00839-202ENST00000429940 AGAP2Q99490 1192 aa15.33■□□□□ 0.05
LINC00839-202ENST00000429940 UBE2OQ9C0C9 1292 aaKnown RBP15.33■□□□□ 0.05
LINC00839-202ENST00000429940 CXCL16Q9H2A7 254 aa15.33■□□□□ 0.05
LINC00839-202ENST00000429940 EPB41L1Q9H4G0 881 aa15.33■□□□□ 0.05
LINC00839-202ENST00000429940 LRRC40Q9H9A6 602 aa15.33■□□□□ 0.05
LINC00839-202ENST00000429940 NEMP1O14524 444 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 TSPAN1O60635 241 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 H2AFYO75367 372 aaKnown RBP15.33■□□□□ 0.04
LINC00839-202ENST00000429940 SULT1E1P49888 294 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 BCAT1P54687 386 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 MAP7Q14244 749 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 PDK1Q15118 436 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 DLG2Q15700 870 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 CNGA3Q16281 694 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 PPM1LQ5SGD2 360 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 RARS2Q5T160 578 aaKnown RBP15.33■□□□□ 0.04
LINC00839-202ENST00000429940 KYQ8NBH2 561 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 B4GALNT2Q8NHY0 566 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 PPP1R36Q96LQ0 422 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 LRGUKQ96M69 825 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 AGAP3Q96P47 875 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 PRDM12Q9H4Q4 367 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 WDR55Q9H6Y2 383 aaPredicted RBP15.33■□□□□ 0.04
LINC00839-202ENST00000429940 NMRAL1Q9HBL8 299 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 CITO14578 2027 aa15.33■□□□□ 0.04
LINC00839-202ENST00000429940 RGSL1A5PLK6 1076 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.32■□□□□ 0.04
LINC00839-202ENST00000429940 DNAJA2O60884 412 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 USP12O75317 370 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 LTFP02788 710 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 SPATA31D3P0C874 917 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 MPSTP25325 297 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 SCNN1AP37088 669 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 ABCG1P45844 678 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 MRPS22P82650 360 aaKnown RBP15.32■□□□□ 0.04
LINC00839-202ENST00000429940 FLOT2Q14254 428 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC00839-202ENST00000429940 ZNF484Q5JVG2 852 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 SPATA31D4Q6ZUB0 917 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 PID1Q7Z2X4 250 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 CLEC14AQ86T13 490 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 DSELQ8IZU8 1212 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 ANKRD52Q8NB46 1076 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 URGCPQ8TCY9 931 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 RNF139Q8WU17 664 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 NLRP7Q8WX94 980 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 PRICKLE1Q96MT3 831 aaPredicted RBP15.32■□□□□ 0.04
LINC00839-202ENST00000429940 ZIC5Q96T25 663 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 ILKAPQ9H0C8 392 aaPredicted RBP15.32■□□□□ 0.04
LINC00839-202ENST00000429940 TMPRSS4Q9NRS4 437 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 IGSF9Q9P2J2 1179 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 DNAH12Q6ZR08 3092 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 SCN1AP35498 2009 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 CREB3O43889 395 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 THOP1P52888 689 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 ARMC3Q5W041 872 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 BNC2Q6ZN30 1099 aaPredicted RBP15.32■□□□□ 0.04
LINC00839-202ENST00000429940 UNC93AQ86WB7 457 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 DGCR14Q96DF8 476 aaKnown RBP15.32■□□□□ 0.04
LINC00839-202ENST00000429940 CNDP1Q96KN2 507 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 CDRT15Q96T59 188 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 GATA5Q9BWX5 397 aaPredicted RBP15.32■□□□□ 0.04
LINC00839-202ENST00000429940 UBAP1Q9NZ09 502 aa15.32■□□□□ 0.04
LINC00839-202ENST00000429940 G3BP2Q9UN86 482 aaKnown RBP15.32■□□□□ 0.04
LINC00839-202ENST00000429940 PLXNA1Q9UIW2 1896 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 SYNJ2BP-COX16A0A087WUM0 186 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 KCNK1O00180 336 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 MATN2O00339 956 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 ATP9BO43861 1147 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 CLPTM1O96005 669 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 C2P06681 752 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 CHRNGP07510 517 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 PDGFRBP09619 1106 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 RGS2P41220 211 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 MATKP42679 507 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 LRRC23Q53EV4 343 aaPredicted RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 HSP90AA5PQ58FG0 334 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 ISLR2Q6UXK2 745 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 DEFB106AQ8N104 65 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 DNAAF3Q8N9W5 541 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 DRAXINQ8NBI3 349 aaPredicted RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 RP9Q8TA86 221 aaKnown RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 MPP4Q96JB8 637 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 OCEL1Q9H607 264 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 PRDM16Q9HAZ2 1276 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 OXSMQ9NWU1 459 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 COX16Q9P0S2 106 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 KLHL8Q9P2G9 620 aaPredicted RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 TUBGCP4Q9UGJ1 667 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 VANGL2Q9ULK5 521 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 ABT1Q9ULW3 272 aaKnown RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 RAB26Q9ULW5 256 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 CRTAMO95727 393 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms