RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
HDLBP-216ENST00000428482 TTC17Q96AE7 1141 aa10.52□□□□□ -0.73
HDLBP-216ENST00000428482 ZNF653Q96CK0 615 aa10.52□□□□□ -0.73
HDLBP-216ENST00000428482 SIPA1Q96FS4 1042 aa10.52□□□□□ -0.73
HDLBP-216ENST00000428482 SELENOOQ9BVL4 669 aa10.52□□□□□ -0.73
HDLBP-216ENST00000428482 GPR174Q9BXC1 333 aa10.52□□□□□ -0.73
HDLBP-216ENST00000428482 C6orf106Q9H6K1 298 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-216ENST00000428482 CAAP1Q9H8G2 361 aa10.52□□□□□ -0.73
HDLBP-216ENST00000428482 DLL3Q9NYJ7 618 aa10.52□□□□□ -0.73
HDLBP-216ENST00000428482 VPS51Q9UID3 782 aa10.52□□□□□ -0.73
HDLBP-216ENST00000428482 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.73
HDLBP-216ENST00000428482 IGLV3-10A0A075B6K4 115 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 A0A1W2PP55 124 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 NRDCO43847 1150 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 SYNCRIPO60506 623 aaKnown RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 MT-CO1P00395 513 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 CTSLP07711 333 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 CD6P30203 668 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 SDC4P31431 198 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 ACSL1P33121 698 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 ACVRL1P37023 503 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 PTPN9P43378 593 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 MAPK8P45983 427 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 PPP2CBP62714 309 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 PPP2CAP67775 309 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 ARF5P84085 180 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 LMNB2Q03252 620 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 HNRNPA1L2Q32P51 320 aaKnown RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 C5orf22Q49AR2 442 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 TDRD12Q587J7 1177 aaKnown RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 C9orf64Q5T6V5 341 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 TTC39BQ5VTQ0 682 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 PEAR1Q5VY43 1037 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 RNF219Q5W0B1 726 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 WDR59Q6PJI9 974 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 LEKR1Q6ZMV7 388 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 LPCAT2Q7L5N7 544 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 TMTC1Q8IUR5 882 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 TMEM139Q8IV31 216 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 MMAAQ8IVH4 418 aaKnown RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 AADATQ8N5Z0 425 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 ARFGAP1Q8N6T3 406 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 FRS2Q8WU20 508 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 SNX19Q92543 992 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 ARHGEF26Q96DR7 871 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 BTBD6Q96KE9 485 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 DDX50Q9BQ39 737 aaKnown RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 WDCPQ9H6R7 721 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 WSB2Q9NYS7 404 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 ZKSCAN5Q9Y2L8 839 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 BZW2Q9Y6E2 419 aaKnown RBP10.51□□□□□ -0.73
HDLBP-216ENST00000428482 AKAP13Q12802 2813 aa10.51□□□□□ -0.73
HDLBP-216ENST00000428482 LAMA5O15230 3695 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 MEI4A8MW99 385 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 SMAD6O43541 496 aaKnown RBP10.5□□□□□ -0.73
HDLBP-216ENST00000428482 BNIP3LO60238 219 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 SRGAP2O75044 1071 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 LRP3O75074 770 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 RHOBTB1O94844 696 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 LRIG2O94898 1065 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 CALB1P05937 261 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 ZNF806P0C7X5 589 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 SRCP12931 536 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 DRD3P35462 400 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 PRKCIP41743 596 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 ADKP55263 362 aaKnown RBP10.5□□□□□ -0.73
HDLBP-216ENST00000428482 CDH4P55283 916 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 CCZ1BP86790 482 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 CCZ1P86791 482 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-216ENST00000428482 ECT2LQ008S8 904 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 BNC1Q01954 994 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 ZNF33AQ06730 810 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 TSR1Q2NL82 804 aaKnown RBP10.5□□□□□ -0.73
HDLBP-216ENST00000428482 TRIM61Q5EBN2 209 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 DCAF12L1Q5VU92 463 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 SFMBT2Q5VUG0 894 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 ZNF776Q68DI1 518 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-216ENST00000428482 SDE2Q6IQ49 451 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 ACAD10Q6JQN1 1059 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 NUDT18Q6ZVK8 323 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 NLRP14Q86W24 1093 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 C12orf50Q8NA57 414 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-216ENST00000428482 CPLX3Q8WVH0 158 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 PRCCQ92733 491 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-216ENST00000428482 PTPRN2Q92932 1015 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 LOXL4Q96JB6 756 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 KLC2Q9H0B6 622 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 MUC3BQ9H195 1237 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 TNKS2Q9H2K2 1166 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 PABPC3Q9H361 631 aaKnown RBP10.5□□□□□ -0.73
HDLBP-216ENST00000428482 ABHD10Q9NUJ1 306 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 VPS28Q9UK41 221 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 PILRBQ9UKJ0 227 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 SARDHQ9UL12 918 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 MFHAS1Q9Y4C4 1052 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 PCDHGA5Q9Y5G8 931 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 BPTFQ12830 3046 aa10.5□□□□□ -0.73
HDLBP-216ENST00000428482 GIPC1O14908 333 aa10.49□□□□□ -0.73
HDLBP-216ENST00000428482 ARHGAP6O43182 974 aa10.49□□□□□ -0.73
HDLBP-216ENST00000428482 ENDOD1O94919 500 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms