RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SH2B3Q9UQQ2 575 aa6.11□□□□□ -1.43
C9orf3-205ENST00000427193 CACNA1HO95180 2353 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 FRMPD4Q14CM0 1322 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 H0YIZ8 118 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 M0QYG6 137 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 SLC16A3O15427 465 aaKnown RBP6.1□□□□□ -1.43
C9orf3-205ENST00000427193 FLOT1O75955 427 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 ZRANB2O95218 330 aaKnown RBP eCLIP6.1□□□□□ -1.43
C9orf3-205ENST00000427193 ONECUT2O95948 504 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 CDKN1CP49918 316 aaPredicted RBP6.1□□□□□ -1.43
C9orf3-205ENST00000427193 HSD17B4P51659 736 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 CCDC96Q2M329 555 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 PRAMEF17Q5VTA0 474 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 ICE2Q659A1 982 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 TMEM108Q6UXF1 575 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 HEATR3Q7Z4Q2 680 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 CPA6Q8N4T0 437 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 SAMD3Q8N6K7 520 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 ANKRD13CQ8N6S4 541 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 SMCR8Q8TEV9 937 aaPredicted RBP6.1□□□□□ -1.43
C9orf3-205ENST00000427193 TIFAQ96CG3 184 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 C8orf76Q96K31 380 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 FAM167AQ96KS9 214 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 FCRL4Q96PJ5 515 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 BHMT2Q9H2M3 363 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 RIC8AQ9NPQ8 531 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.1□□□□□ -1.43
C9orf3-205ENST00000427193 MAP3K20Q9NYL2 800 aaKnown RBP6.1□□□□□ -1.43
C9orf3-205ENST00000427193 TMOD4Q9NZQ9 345 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 VPS54Q9P1Q0 977 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 PNMA2Q9UL42 364 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 RABGAP1Q9Y3P9 1069 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 KIF3AQ9Y496 699 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 RIPK3Q9Y572 518 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 PCDHA1Q9Y5I3 950 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 RIF1Q5UIP0 2472 aaKnown RBP6.1□□□□□ -1.43
C9orf3-205ENST00000427193 BRWD1Q9NSI6 2320 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 ZNF318Q5VUA4 2279 aa6.1□□□□□ -1.43
C9orf3-205ENST00000427193 SMCHD1A6NHR9 2005 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 TPRP12270 2363 aaKnown RBP6.09□□□□□ -1.43
C9orf3-205ENST00000427193 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.09□□□□□ -1.43
C9orf3-205ENST00000427193 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.09□□□□□ -1.43
C9orf3-205ENST00000427193 TRIM43BA6NCK2 446 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 BTBD18B2RXH4 712 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 QSOX1O00391 747 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 PDHA1P08559 390 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 CCND1P24385 295 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 CALML3P27482 149 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 EEFSECP57772 596 aaKnown RBP6.09□□□□□ -1.43
C9orf3-205ENST00000427193 SNAP25P60880 206 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 TRAF1Q13077 416 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 KLF9Q13886 244 aaPredicted RBP6.09□□□□□ -1.43
C9orf3-205ENST00000427193 YTHDF3Q7Z739 585 aaKnown RBP6.09□□□□□ -1.43
C9orf3-205ENST00000427193 DIS3L2Q8IYB7 885 aaKnown RBP6.09□□□□□ -1.43
C9orf3-205ENST00000427193 TRIM43Q96BQ3 446 aaPredicted RBP6.09□□□□□ -1.43
C9orf3-205ENST00000427193 MBOAT7Q96N66 472 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 TEX13BQ9BXU2 312 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 GLT8D2Q9H1C3 349 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 VAT1LQ9HCJ6 419 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 DLL3Q9NYJ7 618 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 NAP1L2Q9ULW6 460 aaPredicted RBP6.09□□□□□ -1.43
C9orf3-205ENST00000427193 PCDHA6Q9UN73 950 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 KCNJ14Q9UNX9 436 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 SPEF1Q9Y4P9 236 aa6.09□□□□□ -1.43
C9orf3-205ENST00000427193 TRIOO75962 3097 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 ASTN1O14525 1302 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 ABCB11O95342 1321 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 DCHS1Q96JQ0 3298 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 CYP3A7-CYP3A51PA0A087WV96 503 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 SMCO2A6NFE2 343 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 TISP43B9A030 160 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 PI4K2BG5E9Z4 385 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 MYO1FO00160 1098 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 PPP6CO00743 305 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 FTLP02792 175 aaPredicted RBP6.08□□□□□ -1.44
C9orf3-205ENST00000427193 TUBB4AP04350 444 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 PIM1P11309 404 aaPredicted RBP6.08□□□□□ -1.44
C9orf3-205ENST00000427193 CYP3A7P24462 503 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 ITGB8P26012 769 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 MPGP29372 298 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 CCND3P30281 292 aaPredicted RBP6.08□□□□□ -1.44
C9orf3-205ENST00000427193 CIITAP33076 1130 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 TRAPPC10P48553 1259 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 BOP1Q14137 746 aaKnown RBP6.08□□□□□ -1.44
C9orf3-205ENST00000427193 ETFDHQ16134 617 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 SLC9A4Q6AI14 798 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 ATL3Q6DD88 541 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 MAVSQ7Z434 540 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 BLIDQ8IZY5 108 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 PRR18Q8N4B5 295 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 C4orf32Q8N8J7 132 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 FAM184AQ8NB25 1140 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 FAM46DQ8NEK8 389 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 CCDC148Q8NFR7 591 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 CCDC12Q8WUD4 166 aaPredicted RBP6.08□□□□□ -1.44
C9orf3-205ENST00000427193 MOV10L1Q9BXT6 1211 aaKnown RBP6.08□□□□□ -1.44
C9orf3-205ENST00000427193 SPATC1LQ9H0A9 340 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 ZSCAN16Q9H4T2 348 aaPredicted RBP6.08□□□□□ -1.44
C9orf3-205ENST00000427193 PSTPIP2Q9H939 334 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 RAVER2Q9HCJ3 691 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms