RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 VAMP7P51809 220 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 METAP1P53582 386 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 TBX4P57082 545 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 HNRNPKP61978 463 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC6-206ENST00000426196 GOLGA7BQ2TAP0 167 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 LINC00303Q3SY05 128 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 FSCBQ5H9T9 825 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 C1orf220Q5T0J3 134 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 AGBL4Q5VU57 503 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 ZCCHC8Q6NZY4 707 aaKnown RBP14.64□□□□□ -0.07
HDAC6-206ENST00000426196 WDR36Q8NI36 951 aaKnown RBP14.64□□□□□ -0.07
HDAC6-206ENST00000426196 OR8D1Q8WZ84 308 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 EXTL1Q92935 676 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 TATDN2Q93075 761 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 SGF29Q96ES7 293 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 IFT43Q96FT9 208 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 PRR11Q96HE9 360 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-206ENST00000426196 HESX1Q9UBX0 185 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 CREBBPQ92793 2442 aa14.64□□□□□ -0.07
HDAC6-206ENST00000426196 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-206ENST00000426196 CPED1A4D0V7 1026 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 C1QTNF3-AMACRE9PGA6 284 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 TULP2O00295 520 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 SLC31A1O15431 190 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 TCEA3O75764 348 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 CENPBP07199 599 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-206ENST00000426196 ITGA2BP08514 1039 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 PRLRP16471 622 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 CASP1P29466 404 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 STK19P49842 368 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-206ENST00000426196 RAD23BP54727 409 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 BST2Q10589 180 aaKnown RBP14.63□□□□□ -0.07
HDAC6-206ENST00000426196 CNTN1Q12860 1018 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 ZNF177Q13360 481 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-206ENST00000426196 STK38Q15208 465 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 CDKN3Q16667 212 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 NADSYN1Q6IA69 706 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 EFL1Q7Z2Z2 1120 aaKnown RBP14.63□□□□□ -0.07
HDAC6-206ENST00000426196 ARRDC3Q96B67 414 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 FAXDC2Q96IV6 333 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 MMRN2Q9H8L6 949 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 CNGB3Q9NQW8 809 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 CISHQ9NSE2 258 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 DNAJC28Q9NX36 388 aa14.63□□□□□ -0.07
HDAC6-206ENST00000426196 PDXKO00764 312 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 NEBLO76041 1014 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 TRIM49P0CI25 452 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 TRIM49CP0CI26 452 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 VAV1P15498 845 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 SULT2A1Q06520 285 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 UBAP2LQ14157 1087 aaKnown RBP14.62□□□□□ -0.07
HDAC6-206ENST00000426196 MS4A13Q5J8X5 152 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 GUSBP11Q6P575 273 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 APCDD1Q8J025 514 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 CFAP52Q8N1V2 620 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 SCML4Q8N228 414 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 OR13H1Q8NG92 308 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 NUCKS1Q9H1E3 243 aaKnown RBP14.62□□□□□ -0.07
HDAC6-206ENST00000426196 TSPAN16Q9UKR8 245 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 SARDHQ9UL12 918 aa14.62□□□□□ -0.07
HDAC6-206ENST00000426196 CCDC187A0A096LP49 1063 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 PMS2P1A4D2B8 440 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 H3BM21 787 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 MAPK13O15264 365 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 PPFIA2O75334 1257 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 FAM87AP0C7U9 286 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 KRT13P13646 458 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 ZNF18P17022 549 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 ITGB6P18564 788 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 HNRNPA2B1P22626 353 aaKnown RBP14.61□□□□□ -0.07
HDAC6-206ENST00000426196 NASPP49321 788 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-206ENST00000426196 DAOAP59103 153 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 TLE1Q04724 770 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 PPP3CAQ08209 521 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 DCAF6Q58WW2 860 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 NEK5Q6P3R8 708 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 INTS8Q75QN2 995 aaKnown RBP14.61□□□□□ -0.07
HDAC6-206ENST00000426196 PTAR1Q7Z6K3 402 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-206ENST00000426196 DCP2Q8IU60 420 aaKnown RBP14.61□□□□□ -0.07
HDAC6-206ENST00000426196 WDR48Q8TAF3 677 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 FAM174AQ8TBP5 190 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 KLK6Q92876 244 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 MYEOVQ96EZ4 313 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 SEMA3CQ99985 751 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 KCTD10Q9H3F6 313 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 FZD3Q9NPG1 666 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 EXOC1Q9NV70 894 aa14.61□□□□□ -0.07
HDAC6-206ENST00000426196 TEP1Q99973 2627 aaKnown RBP14.6□□□□□ -0.07
HDAC6-206ENST00000426196 A0A1W2PQU0 124 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 A6NNZ2 444 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 SPTLC2O15270 562 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 ALOX15BO15296 676 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 POLR2DO15514 142 aaKnown RBP14.6□□□□□ -0.07
HDAC6-206ENST00000426196 EFSO43281 561 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 SETSIPP0DME0 302 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 LCP1P13796 627 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 CCDC15Q0P6D6 951 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 CUL4BQ13620 913 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 SLC12A1Q13621 1099 aa14.6□□□□□ -0.07
HDAC6-206ENST00000426196 NR0B2Q15466 257 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms