RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 TMA16Q96EY4 203 aaKnown RBP5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 LMLNQ96KR4 655 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 C1orf74Q96LT6 269 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 RPRD1AQ96P16 312 aaPredicted RBP5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 BBS2Q9BXC9 721 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 OSBPL2Q9H1P3 480 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 DHX35Q9H5Z1 703 aaKnown RBP5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 RUBCNLQ9H714 662 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 LUC7LQ9NQ29 371 aaKnown RBP5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 TRPV5Q9NQA5 729 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 NDFIP2Q9NV92 336 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 ETNK2Q9NVF9 386 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 MARK1Q9P0L2 795 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 ZNF212Q9UDV6 495 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 OR12D3Q9UGF7 316 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 SLC12A6Q9UHW9 1150 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 HCN2Q9UL51 889 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 PACSIN2Q9UNF0 486 aaPredicted RBP5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 MFHAS1Q9Y4C4 1052 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 HRH3Q9Y5N1 445 aa5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 KIF26AQ9ULI4 1882 aaPredicted RBP5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 HELZP42694 1942 aaKnown RBP5.89□□□□□ -1.47
HERPUD2-204ENST00000426180 IGLV3-10A0A075B6K4 115 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 C3orf70A6NLC5 250 aaPredicted RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 F5H5T6 163 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 DDX3YO15523 660 aaKnown RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 DCXO43602 365 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 SPOPO43791 374 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 NRDCO43847 1150 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 CREB3O43889 395 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 CACNG3O60359 315 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 TULP3O75386 442 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 LRIG2O94898 1065 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 EGFP01133 1207 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 GOT1P17174 413 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 IL4RP24394 825 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 MSX1P28360 303 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 HOXC13P31276 330 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 CHKAP35790 457 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 PEX5P50542 639 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 PFKPQ01813 784 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 NRG1Q02297 640 aaPredicted RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 GAD2Q05329 585 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 FZD5Q13467 585 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 DPYSQ14117 519 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 UBAP2LQ14157 1087 aaKnown RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 LLGL1Q15334 1064 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 MLF2Q15773 248 aaPredicted RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 ARL13BQ3SXY8 428 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 MPPE1Q53F39 396 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 BOLA3Q53S33 107 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 PPP6R3Q5H9R7 873 aaPredicted RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 TMEM215Q68D42 235 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 FSTL4Q6MZW2 842 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 CXorf57Q6NSI4 855 aaKnown RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 RWDD4Q6NW29 188 aaKnown RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 ZNF662Q6ZS27 426 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 TPRG1Q6ZUI0 275 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 TFAP2DQ7Z6R9 452 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 NT5DC3Q86UY8 548 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 NLRP14Q86W24 1093 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 TP53INP2Q8IXH6 220 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 UBALD2Q8IYN6 164 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 CCAR2Q8N163 923 aaKnown RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 CARNMT1Q8N4J0 409 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 HJURPQ8NCD3 748 aaPredicted RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 TEKT4Q8WW24 435 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 ALG3Q92685 438 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 EDAQ92838 391 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 TBC1D31Q96DN5 1066 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 FOXQ1Q9C009 403 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 KLC2Q9H0B6 622 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 EPHX3Q9H6B9 360 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 PCDH18Q9HCL0 1135 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 ARHGEF3Q9NR81 526 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 RBM12Q9NTZ6 932 aaKnown RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 DNAJC17Q9NVM6 304 aaKnown RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 POLR3BQ9NW08 1133 aaPredicted RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 CWC15Q9P013 229 aaKnown RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 WNT16Q9UBV4 365 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 FBXO10Q9UK96 956 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 FBXL21Q9UKT6 434 aa5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 INTS6Q9UL03 887 aaKnown RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 ATXN7L1Q9ULK2 861 aaPredicted RBP5.88□□□□□ -1.47
HERPUD2-204ENST00000426180 FAM86C2PA6NEL3 165 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 TMEM221A6NGB7 291 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 PRRT4C9JH25 899 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 K7EQS6 105 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 M0R296 226 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 EEF2KO00418 725 aaKnown RBP5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 PI15O43692 258 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 KRT86O43790 486 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 LUC7L3O95232 432 aaKnown RBP5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 KRT1P04264 644 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 CYBBP04839 570 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 DESP17661 470 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 GLDCP23378 1020 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 KDELR1P24390 212 aa5.87□□□□□ -1.47
HERPUD2-204ENST00000426180 CTNNA2P26232 953 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms