RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 CXorf57Q6NSI4 855 aaKnown RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 NCEH1Q6PIU2 408 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 MMAAQ8IVH4 418 aaKnown RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 FAM71AQ8IYT1 594 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 STK40Q8N2I9 435 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 ZNF557Q8N988 423 aaPredicted RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 MDM1Q8TC05 714 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 PPP1R13BQ96KQ4 1090 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 RPL10LQ96L21 214 aaKnown RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 SLC6A18Q96N87 628 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 SLC2A13Q96QE2 648 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 CPXM1Q96SM3 734 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 CDC6Q99741 560 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 DDX50Q9BQ39 737 aaKnown RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 BPIFA3Q9BQP9 254 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 GANQ9H2C0 597 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 POPDC2Q9HBU9 364 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 OR51B4Q9Y5P0 310 aa13.38□□□□□ -0.27
VRK3-203ENST00000424804 COL5A1P20908 1838 aaPredicted RBP13.38□□□□□ -0.27
VRK3-203ENST00000424804 SYNJ2BP-COX16A0A087WUM0 186 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 A0A1B0GTQ1 180 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 I6L893 689 aaPredicted RBP13.37□□□□□ -0.27
VRK3-203ENST00000424804 EPHB6O15197 1021 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 SART1O43290 800 aaKnown RBP13.37□□□□□ -0.27
VRK3-203ENST00000424804 GRAP2O75791 330 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 NUMBP49757 651 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 RACK1P63244 317 aaKnown RBP13.37□□□□□ -0.27
VRK3-203ENST00000424804 TPM4P67936 248 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 TEAD4Q15561 434 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 TTC31Q49AM3 519 aaPredicted RBP13.37□□□□□ -0.27
VRK3-203ENST00000424804 FILIP1LQ4L180 1135 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 OTUD1Q5VV17 481 aaPredicted RBP13.37□□□□□ -0.27
VRK3-203ENST00000424804 CIR1Q86X95 450 aaPredicted RBP13.37□□□□□ -0.27
VRK3-203ENST00000424804 DEFB106AQ8N104 65 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 NAA15Q9BXJ9 866 aaKnown RBP13.37□□□□□ -0.27
VRK3-203ENST00000424804 HSD3B7Q9H2F3 369 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 ANLNQ9NQW6 1124 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 COX16Q9P0S2 106 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 ARHGAP20Q9P2F6 1191 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
VRK3-203ENST00000424804 ASXL3Q9C0F0 2248 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 EDDM13A0A1B0GTR0 161 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 GOLGA6L19H0YKK7 550 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 TNFSF14O43557 240 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 LATO43561 262 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 SERPINC1P01008 464 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 MMEP08473 750 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 GOT1P17174 413 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 STAT1P42224 750 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
VRK3-203ENST00000424804 CCR5P51681 352 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 ST8SIA6P61647 398 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 IL9RQ01113 521 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 CDH18Q13634 790 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 SMAD1Q15797 465 aaKnown RBP13.36□□□□□ -0.27
VRK3-203ENST00000424804 SKOR2Q2VWA4 1001 aaPredicted RBP13.36□□□□□ -0.27
VRK3-203ENST00000424804 ZSCAN23Q3MJ62 389 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 C5orf22Q49AR2 442 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 FBXL22Q6P050 247 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 FAM183BPQ6ZVS7 135 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 KANSL1Q7Z3B3 1105 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 C14orf80Q86SX3 495 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 NOP9Q86U38 636 aaKnown RBP13.36□□□□□ -0.27
VRK3-203ENST00000424804 CCAR2Q8N163 923 aaKnown RBP13.36□□□□□ -0.27
VRK3-203ENST00000424804 TMEM35BQ8NCS4 154 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 OR2T34Q8NGX1 318 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 FUCA2Q9BTY2 467 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 CBX8Q9HC52 389 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 SEPT11Q9NVA2 429 aaKnown RBP13.36□□□□□ -0.27
VRK3-203ENST00000424804 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.27
VRK3-203ENST00000424804 DKK4Q9UBT3 224 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 SARDHQ9UL12 918 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 FZD4Q9ULV1 537 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 NCKAP1Q9Y2A7 1128 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 SIK3Q9Y2K2 1263 aa13.36□□□□□ -0.27
VRK3-203ENST00000424804 MYLKQ15746 1914 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 FAM47DPA6NHR8 397 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 RNF103O00237 685 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 CBX4O00257 560 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 PLK4O00444 970 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 TEX33O43247 280 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 RNASEH2AO75792 299 aaKnown RBP13.35□□□□□ -0.27
VRK3-203ENST00000424804 ERBB2P04626 1255 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 PDGFRAP16234 1089 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 SOX5P35711 763 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 CCT8P50990 548 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 ADPRHP54922 357 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 SNX16P57768 344 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 RNASE9P60153 205 aaKnown RBP13.35□□□□□ -0.27
VRK3-203ENST00000424804 PPP2CBP62714 309 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 PPP2CAP67775 309 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 SUZ12Q15022 739 aaKnown RBP13.35□□□□□ -0.27
VRK3-203ENST00000424804 PTPN20Q4JDL3 420 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 C2CD6Q53TS8 623 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 OLFML1Q6UWY5 402 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 LUZP1Q86V48 1076 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 CHSY1Q86X52 802 aa13.35□□□□□ -0.27
VRK3-203ENST00000424804 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms