RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 TTC36A6NLP5 189 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 TMEM114B3SHH9 223 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 TK2O00142 265 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 GJB1P08034 283 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 PSMD7P51665 324 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 ARL13AQ5H913 290 aaPredicted RBP17■□□□□ 0.31
NPC1L1-203ENST00000423141 STYK1Q6J9G0 422 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 PMF1Q6P1K2 205 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 OLFML1Q6UWY5 402 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 C4orf22Q6V702 233 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 LRRC71Q8N4P6 559 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 PCDH20Q8N6Y1 951 aaKnown RBP17■□□□□ 0.31
NPC1L1-203ENST00000423141 CIB1Q99828 191 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 GBA2Q9HCG7 927 aaPredicted RBP17■□□□□ 0.31
NPC1L1-203ENST00000423141 HESX1Q9UBX0 185 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 MAGED2Q9UNF1 606 aaPredicted RBP17■□□□□ 0.31
NPC1L1-203ENST00000423141 MYRFQ9Y2G1 1151 aa17■□□□□ 0.31
NPC1L1-203ENST00000423141 TCAF2A6NFQ2 919 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 PIGNO95427 931 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 TFEBP19484 476 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 CHRNA5P30532 468 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 MAGEA12P43365 314 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 CD97P48960 835 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 PTK2BQ14289 1009 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 EML3Q32P44 896 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 SLC44A4Q53GD3 710 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 KRT80Q6KB66 452 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 PYROXD2Q8N2H3 581 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 LZTR1Q8N653 840 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 RMND5BQ96G75 393 aaPredicted RBP16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 BIRC8Q96P09 236 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 RBBP8Q99708 897 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 NIFKQ9BYG3 293 aaKnown RBP16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 OSBPL6Q9BZF3 934 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 NMRAL1Q9HBL8 299 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 INIPQ9NRY2 104 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 FAM49BQ9NUQ9 324 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 BCAP29Q9UHQ4 241 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 AP4S1Q9Y587 144 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 A0A0A0MRY4 1105 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 TMEM221A6NGB7 291 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 MDM4O15151 490 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 B4GALT4O60513 344 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 USP12O75317 370 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 ARSAP15289 507 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 PSMB4P28070 264 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 RPL14P50914 215 aaKnown RBP16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 CCR3P51677 355 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 NCBP2-AS2Q69YL0 99 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 DHRS4L2Q6PKH6 230 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 CLVS1Q8IUQ0 354 aaPredicted RBP16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 FIBCD1Q8N539 461 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 GIPC3Q8TF64 312 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 GFM2Q969S9 779 aaKnown RBP16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 SPATA13Q96N96 652 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 TRPV6Q9H1D0 765 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 VPS33BQ9H267 617 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 PLGRKTQ9HBL7 147 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 ZBTB26Q9HCK0 441 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 SEPT10Q9P0V9 454 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 PGAP2Q9UHJ9 254 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 USP21Q9UK80 565 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 CNOT11Q9UKZ1 510 aaKnown RBP16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 CLEC11AQ9Y240 323 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 SNX13Q9Y5W8 968 aa16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 COPG1Q9Y678 874 aaKnown RBP16.99■□□□□ 0.31
NPC1L1-203ENST00000423141 TMEM233B4DJY2 109 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 C9IYK1 514 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 C2P06681 752 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 VDRP11473 427 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 MLNP12872 115 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 GARSP41250 739 aaKnown RBP16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 GRIA4P48058 902 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 NDST1P52848 882 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 RALGDSQ12967 914 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 SURF1Q15526 300 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 TARBP2Q15633 366 aaKnown RBP16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 ANKRD23Q86SG2 305 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 CLEC14AQ86T13 490 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 CPSF7Q8N684 471 aaKnown RBP16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 CSPG4P5Q96PW8 444 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 KCTD15Q96SI1 283 aaPredicted RBP16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 CPNE1Q99829 537 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 EFCAB1Q9HAE3 211 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 OXSMQ9NWU1 459 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 KPNA7A9QM74 516 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 NSUN2Q08J23 767 aaKnown RBP eCLIP16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 LAMTOR4Q0VGL1 99 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 C1QTNF12Q5T7M4 302 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 GRTP1Q5TC63 336 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 GK5Q6ZS86 529 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 FAM110BQ8TC76 370 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 SLCO4A1Q96BD0 722 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 CDHR1Q96JP9 859 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 TBCBQ99426 244 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 TBCCD1Q9NVR7 557 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 CDC14AQ9UNH5 594 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 RAP2CQ9Y3L5 183 aa16.98■□□□□ 0.31
NPC1L1-203ENST00000423141 ANK1P16157 1881 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms