RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 TRIM10Q9UDY6 481 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 PCSK1NQ9UHG2 260 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 INTS6Q9UL03 887 aaKnown RBP9.94□□□□□ -0.82
HERC3-204ENST00000422770 PCDHA13Q9Y5I0 950 aa9.94□□□□□ -0.82
HERC3-204ENST00000422770 TNRC6BQ9UPQ9 1833 aaKnown RBP9.93□□□□□ -0.82
HERC3-204ENST00000422770 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 TCRBV5S1A1TA0A578 114 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 MACROD2A1Z1Q3 448 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 RCCD1A6NED2 376 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 TMEM110-MUSTN1A8MSY1 372 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 TTC34A8MYJ7 566 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 CBX4O00257 560 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 PRPSAP2O60256 369 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 RHOBTB1O94844 696 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 ENDOD1O94919 500 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 LCA5LO95447 670 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 BCKDHBP21953 392 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 GJC1P36383 396 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 RPL6Q02878 288 aaKnown RBP9.93□□□□□ -0.82
HERC3-204ENST00000422770 CREB5Q02930 508 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 SULT2A1Q06520 285 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 SLC12A1Q13621 1099 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 PTPRNQ16849 979 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 PPP1R15BQ5SWA1 713 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 C6orf118Q5T5N4 469 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 RNF43Q68DV7 783 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 IL31Q6EBC2 164 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 CXorf57Q6NSI4 855 aaKnown RBP9.93□□□□□ -0.82
HERC3-204ENST00000422770 KIAA0907Q7Z7F0 614 aaPredicted RBP9.93□□□□□ -0.82
HERC3-204ENST00000422770 TMPRSS6Q8IU80 811 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 TMEFF1Q8IYR6 380 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 ABCA7Q8IZY2 2146 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 PYROXD2Q8N2H3 581 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 FRMD1Q8N878 549 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 OR52K2Q8NGK3 314 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 TTC17Q96AE7 1141 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 ARHGEF26Q96DR7 871 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 MRGPRX1Q96LB2 322 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 C1orf74Q96LT6 269 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 EPAS1Q99814 870 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 NUP85Q9BW27 656 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 MAGEB5Q9BZ81 275 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 TSGA10Q9BZW7 698 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 ISCUQ9H1K1 167 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 ARRDC1-AS1Q9H2J1 176 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 DHX35Q9H5Z1 703 aaKnown RBP9.93□□□□□ -0.82
HERC3-204ENST00000422770 ATP13A1Q9HD20 1204 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.93□□□□□ -0.82
HERC3-204ENST00000422770 CTTNBP2NLQ9P2B4 639 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 SUN2Q9UH99 717 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 DNAI1Q9UI46 699 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 ANAPC7Q9UJX3 599 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 AP4E1Q9UPM8 1137 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 USP34Q70CQ2 3546 aa9.93□□□□□ -0.82
HERC3-204ENST00000422770 SHROOM3Q8TF72 1996 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 ADAMTS9Q9P2N4 1935 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 MYO15AQ9UKN7 3530 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 ATXN2Q99700 1313 aaKnown RBP9.92□□□□□ -0.82
HERC3-204ENST00000422770 EDDM13A0A1B0GTR0 161 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 TMEM191CA6NGB0 347 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 FAM72CH0Y354 149 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 DAPK3O43293 454 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 SNAP91O60641 907 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 RNASEH1O60930 286 aaKnown RBP9.92□□□□□ -0.82
HERC3-204ENST00000422770 SIN3BO75182 1162 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 ZNF217O75362 1048 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 LRIG2O94898 1065 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 DNTTP04053 509 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 SRPRAP08240 638 aaKnown RBP9.92□□□□□ -0.82
HERC3-204ENST00000422770 TMEM253P0C7T8 217 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 EPHB2P29323 1055 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 P2RY2P41231 377 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 PSMD8P48556 350 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 GALCP54803 685 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 TPI1P60174 286 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 KIF5AQ12840 1032 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 PLK5Q496M5 336 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 TTC31Q49AM3 519 aaPredicted RBP9.92□□□□□ -0.82
HERC3-204ENST00000422770 PPP6R3Q5H9R7 873 aaPredicted RBP9.92□□□□□ -0.82
HERC3-204ENST00000422770 ZFYVE27Q5T4F4 411 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 FAM72AQ5TYM5 149 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 DAB2IPQ5VWQ8 1189 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 FAM72DQ6L9T8 149 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 LINGO4Q6UY18 593 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 LPCAT2Q7L5N7 544 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 CYP2U1Q7Z449 544 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 BNIPLQ7Z465 357 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 C11orf74Q86VG3 221 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 FAM72BQ86X60 149 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 ATP11CQ8NB49 1132 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 OR7D4Q8NG98 312 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 OR2T3Q8NH03 318 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 ZNF564Q8TBZ8 553 aaPredicted RBP9.92□□□□□ -0.82
HERC3-204ENST00000422770 KIAA1524Q8TCG1 905 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 RFFLQ8WZ73 363 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 SNX19Q92543 992 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 CENPIQ92674 756 aaPredicted RBP9.92□□□□□ -0.82
HERC3-204ENST00000422770 NTAN1Q96AB6 310 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 BTBD6Q96KE9 485 aa9.92□□□□□ -0.82
HERC3-204ENST00000422770 LMLNQ96KR4 655 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms