RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 EDEM2Q9BV94 578 aa15.24■□□□□ 0.03
LINC01840-201ENST00000421870 NUSAP1Q9BXS6 441 aaKnown RBP15.24■□□□□ 0.03
LINC01840-201ENST00000421870 RETREG1Q9H6L5 497 aa15.24■□□□□ 0.03
LINC01840-201ENST00000421870 CAPN10Q9HC96 672 aa15.24■□□□□ 0.03
LINC01840-201ENST00000421870 SEPT11Q9NVA2 429 aaKnown RBP15.24■□□□□ 0.03
LINC01840-201ENST00000421870 SLC6A14Q9UN76 642 aa15.24■□□□□ 0.03
LINC01840-201ENST00000421870 ATP9BO43861 1147 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 RNASEH1O60930 286 aaKnown RBP15.23■□□□□ 0.03
LINC01840-201ENST00000421870 SRGAP2O75044 1071 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 GZMAP12544 262 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 GPD1P21695 349 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 UBASH3AP57075 661 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 ASIC2Q16515 512 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 CDO1Q16878 200 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 ARL13BQ3SXY8 428 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 WDR45BQ5MNZ6 344 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 MANEALQ5VSG8 457 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 SFMBT2Q5VUG0 894 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 E4F1Q66K89 784 aaPredicted RBP15.23■□□□□ 0.03
LINC01840-201ENST00000421870 ZNF571Q7Z3V5 609 aaPredicted RBP15.23■□□□□ 0.03
LINC01840-201ENST00000421870 FAM172AQ8WUF8 416 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 PSMB7Q99436 277 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 ZYG11BQ9C0D3 744 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 HAUS4Q9H6D7 363 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 TAS2R14Q9NYV8 317 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 MPP6Q9NZW5 540 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 OR12D3Q9UGF7 316 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 PCDH15Q96QU1 1955 aa15.23■□□□□ 0.03
LINC01840-201ENST00000421870 A0A1W2PQJ5 194 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 ILVBLA1L0T0 632 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 C4orf47A7E2U8 309 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 GOLGA6L19H0YKK7 550 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 RHOCP08134 193 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 RRM1P23921 792 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 MAOBP27338 520 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 OR1E1P30953 314 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 SLC8A1P32418 973 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 ZNF143P52747 638 aaPredicted RBP15.22■□□□□ 0.03
LINC01840-201ENST00000421870 RPL7AP62424 266 aaKnown RBP15.22■□□□□ 0.03
LINC01840-201ENST00000421870 KRT83P78385 493 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 SFSWAPQ12872 951 aaKnown RBP15.22■□□□□ 0.03
LINC01840-201ENST00000421870 CST6Q15828 149 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 C6orf118Q5T5N4 469 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 DCAF12L1Q5VU92 463 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 IL31Q6EBC2 164 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 DNAJC24Q6P3W2 148 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 ZNF783Q6ZMS7 281 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 CACUL1Q86Y37 369 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 RGL4Q8IZJ4 473 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 SH2D3CQ8N5H7 860 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 C1orf216Q8TAB5 229 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 NTAN1Q96AB6 310 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 MAGEB5Q9BZ81 275 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 BTBD1Q9H0C5 482 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 PABPC3Q9H361 631 aaKnown RBP15.22■□□□□ 0.03
LINC01840-201ENST00000421870 SGK2Q9HBY8 427 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 TMEM9BQ9NQ34 198 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 SLC25A13Q9UJS0 675 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 VPS28Q9UK41 221 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 HS3ST2Q9Y278 367 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 NCKAP1Q9Y2A7 1128 aa15.22■□□□□ 0.03
LINC01840-201ENST00000421870 CACNA1AO00555 2505 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 ATXN2Q99700 1313 aaKnown RBP15.21■□□□□ 0.03
LINC01840-201ENST00000421870 A0A0D9SEW6 157 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 C10orf142B7Z368 130 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 DDX3XO00571 662 aaKnown RBP eCLIP15.21■□□□□ 0.03
LINC01840-201ENST00000421870 VAV1P15498 845 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 ENGP17813 658 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 NUMBP49757 651 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 SCAPQ12770 1279 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 ELAVL3Q14576 367 aaKnown RBP15.21■□□□□ 0.03
LINC01840-201ENST00000421870 DLG2Q15700 870 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 TTC31Q49AM3 519 aaPredicted RBP15.21■□□□□ 0.03
LINC01840-201ENST00000421870 PLEKHA7Q6IQ23 1121 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 FAM124AQ86V42 546 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 MMAAQ8IVH4 418 aaKnown RBP15.21■□□□□ 0.03
LINC01840-201ENST00000421870 STK40Q8N2I9 435 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 SYN2Q92777 582 aaPredicted RBP15.21■□□□□ 0.03
LINC01840-201ENST00000421870 CNPY3Q9BT09 278 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 C2orf49Q9BVC5 232 aaPredicted RBP15.21■□□□□ 0.03
LINC01840-201ENST00000421870 MUC3BQ9H195 1237 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 FBXL12Q9NXK8 326 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 SUSD2Q9UGT4 822 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 ADAMTS1Q9UHI8 967 aa15.21■□□□□ 0.03
LINC01840-201ENST00000421870 CACNA1EQ15878 2313 aa15.21■□□□□ 0.02
LINC01840-201ENST00000421870 CXorf51AA0A1B0GTR3 108 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 A0A1B0GTW7 788 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 MED19A0JLT2 244 aaPredicted RBP15.2■□□□□ 0.02
LINC01840-201ENST00000421870 ANKRD62A6NC57 917 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 FAM72CH0Y354 149 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 ARHGAP33O14559 1287 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 MCF2LO15068 1137 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 MID1O15344 667 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 CCP110O43303 1012 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 RTN2O75298 545 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 SEMA4FO95754 770 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 MT-CO1P00395 513 aa15.2■□□□□ 0.02
LINC01840-201ENST00000421870 FTLP02792 175 aaPredicted RBP15.2■□□□□ 0.02
LINC01840-201ENST00000421870 PLEKP08567 350 aaPredicted RBP15.2■□□□□ 0.02
LINC01840-201ENST00000421870 SRCP12931 536 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms