RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TTC31Q49AM3 519 aaPredicted RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 RAB6CQ53S08 254 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 KCNT1Q5JUK3 1230 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 BRMS1LQ5PSV4 323 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 FAM102AQ5T9C2 384 aaPredicted RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 NAA35Q5VZE5 725 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 LAYNQ6UX15 382 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 DBX2Q6ZNG2 339 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 CCDC117Q8IWD4 279 aaPredicted RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 CPA5Q8WXQ8 436 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 RNF34Q969K3 372 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 PSMB7Q99436 277 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 TKTL2Q9H0I9 626 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 SIK2Q9H0K1 926 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 RAB6CQ9H0N0 254 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 NEUROG2Q9H2A3 272 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 SLC32A1Q9H598 525 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 WDCPQ9H6R7 721 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 TM9SF3Q9HD45 589 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 FNDC3AQ9Y2H6 1198 aaKnown RBP11.36□□□□□ -0.59
SSBP3-206ENST00000420121 CEP83Q9Y592 693 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 CHD6Q8TD26 2715 aa11.36□□□□□ -0.59
SSBP3-206ENST00000420121 ZFHX4Q86UP3 3567 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 DRGXA6NNA5 263 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 GOLGA8SH3BPF8 625 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 ATP9BO43861 1147 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 CLDN11O75508 207 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 GFPT2O94808 682 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 ENDOD1O94919 500 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 ZNF883P0CG24 379 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 CD27P26842 260 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 GRIA4P48058 902 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 PSMD8P48556 350 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 COPB1P53618 953 aaKnown RBP11.35□□□□□ -0.59
SSBP3-206ENST00000420121 CDH4P55283 916 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 SIM1P81133 766 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-206ENST00000420121 CDR2Q01850 454 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 DEUP1Q05D60 604 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 SULT2A1Q06520 285 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 PTP4A2Q12974 167 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 MTA1Q13330 715 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 ELAVL3Q14576 367 aaKnown RBP11.35□□□□□ -0.59
SSBP3-206ENST00000420121 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 HLA-BQ31612 363 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 KIAA0895LQ68EN5 471 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 NCEH1Q6PIU2 408 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 ARCQ7LC44 396 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 NAXDQ8IW45 347 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 EMC1Q8N766 993 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 BAHD1Q8TBE0 780 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-206ENST00000420121 SNX19Q92543 992 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 GATA6Q92908 595 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 CFAP57Q96MR6 1250 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 PCDHB18PQ96TA0 734 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 SCNM1Q9BWG6 230 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 PDCL3Q9H2J4 239 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 GAREM1Q9H706 876 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 NLRC4Q9NPP4 1024 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 FAM207AQ9NSI2 230 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-206ENST00000420121 LIMA1Q9UHB6 759 aaKnown RBP11.35□□□□□ -0.59
SSBP3-206ENST00000420121 SARDHQ9UL12 918 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 FZD4Q9ULV1 537 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 STAP1Q9ULZ2 295 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 SNX11Q9Y5W9 270 aa11.35□□□□□ -0.59
SSBP3-206ENST00000420121 CFAP47Q6ZTR5 3102 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 DMXL2Q8TDJ6 3036 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 ARID1BQ8NFD5 2236 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 LRRC10BA6NIK2 292 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 C1QTNF9BB2RNN3 333 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 RNF103O00237 685 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 PLK4O00444 970 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 WNT9AO14904 365 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 HYAL3O43820 417 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 SNAP91O60641 907 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 RNASEH2AO75792 299 aaKnown RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 KRT37O76014 449 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 FSBPO95073 299 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 MT-CO1P00395 513 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 F9P00740 461 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 WNT1P04628 370 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 C1QTNF9P0C862 333 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 UNGP13051 313 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 C5AR1P21730 350 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 MMP8P22894 467 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 SOX5P35711 763 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 CTSKP43235 329 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 AFF3P51826 1226 aaKnown RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 ADPRHP54922 357 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 OXCT1P55809 520 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 ZNF177Q13360 481 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 SYCP1Q15431 976 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 ST3GAL2Q16842 350 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 RNF219Q5W0B1 726 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 SH2D3CQ8N5H7 860 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 JOSD2Q8TAC2 188 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 C1orf74Q96LT6 269 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 GBP4Q96PP9 640 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 SPAG5Q96R06 1193 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms