RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SAYSD1Q9NPB0 183 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 KLQ9UEF7 1012 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 TNFSF13BQ9Y275 285 aa4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 ZNF335Q9H4Z2 1342 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P49-201ENST00000418882 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 TRBV5-7A0A0A0MS05 114 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 IGLV5-39A0A0G2JS06 123 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 IFRD1O00458 451 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 BMP15O95972 392 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 HOXB9P17482 250 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 HALP42357 657 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 PLCD1P51178 756 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 GAD2Q05329 585 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 PMPCAQ10713 525 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 PKP1Q13835 747 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 GXYLT1Q4G148 440 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 LDHAL6AQ6ZMR3 332 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 KDELC2Q7Z4H8 507 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 CCDC25Q86WR0 208 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 PELI3Q8N2H9 469 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 INPP5DQ92835 1189 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 FAM167BQ9BTA0 163 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 TRIM31Q9BZY9 425 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 POT1Q9NUX5 634 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 HDAC6Q9UBN7 1215 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 BAG5Q9UL15 447 aa4.9□□□□□ -1.63
HMGB1P49-201ENST00000418882 STX16-NPEPL1H3BU86 382 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 STX16O14662 325 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 HNRNPRO43390 633 aaKnown RBP4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 TULP3O75386 442 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 TFRCP02786 760 aaKnown RBP4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 TK1P04183 234 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 DHRS4L1P0CG22 281 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 HOXB2P14652 356 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 RBM5P52756 815 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 KRTAP1-1Q07627 177 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 TWIST1Q15672 202 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 TTC39AQ5SRH9 613 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 MANEAQ5SRI9 462 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 HERC6Q8IVU3 1022 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 TMEM174Q8WUU8 243 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 AFG1LQ8WV93 481 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 CCT6BQ92526 530 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 PAGR1Q9BTK6 254 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 THAP1Q9NVV9 213 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 KIF17Q9P2E2 1029 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 UPB1Q9UBR1 384 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 SLC25A13Q9UJS0 675 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 GPR52Q9Y2T5 361 aa4.89□□□□□ -1.63
HMGB1P49-201ENST00000418882 KLRC2P26717 231 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 ALDH7A1P49419 539 aaKnown RBP4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 MVDP53602 400 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 ALKBH1Q13686 389 aaKnown RBP4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 GPR162Q16538 588 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 PRTGQ2VWP7 1150 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 FTSJ3Q8IY81 847 aaKnown RBP4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 TMEM199Q8N511 208 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 FSIP1Q8NA03 581 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 C9orf106Q8NAJ2 232 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 CMASQ8NFW8 434 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 SPPL3Q8TCT6 385 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 NLRP4Q96MN2 994 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 DECR2Q9NUI1 292 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 ANAPC4Q9UJX5 808 aa4.88□□□□□ -1.63
HMGB1P49-201ENST00000418882 B4DGG1 531 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 H3BNX3 289 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 SYN3O14994 580 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 MDM4O15151 490 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 FCGR2AP12318 317 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 RXRAP19793 462 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 PNPLA4P41247 253 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 THOC5Q13769 683 aaKnown RBP4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 PTGR1Q14914 329 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 PLK5Q496M5 336 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 EPHA10Q5JZY3 1008 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 FAM171A1Q5VUB5 890 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 TRIM74Q86UV6 250 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 TRIM73Q86UV7 250 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 BRSK2Q8IWQ3 736 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 SLC25A41Q8N5S1 370 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 KDM1BQ8NB78 822 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 ASB5Q8WWX0 329 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 CTDSP1Q9GZU7 261 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 FAM234AQ9H0X4 552 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 HIPK3Q9H422 1215 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 TMLHEQ9NVH6 421 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 PLEKHB1Q9UF11 243 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 SQORQ9Y6N5 450 aa4.87□□□□□ -1.63
HMGB1P49-201ENST00000418882 CD8B2A6NJW9 211 aa4.86□□□□□ -1.63
HMGB1P49-201ENST00000418882 H0YGN5 161 aa4.86□□□□□ -1.63
HMGB1P49-201ENST00000418882 IFNA2P01563 188 aa4.86□□□□□ -1.63
HMGB1P49-201ENST00000418882 CYP4B1P13584 511 aa4.86□□□□□ -1.63
HMGB1P49-201ENST00000418882 CD72P21854 359 aa4.86□□□□□ -1.63
HMGB1P49-201ENST00000418882 GSTM2P28161 218 aa4.86□□□□□ -1.63
HMGB1P49-201ENST00000418882 CHRNA5P30532 468 aa4.86□□□□□ -1.63
HMGB1P49-201ENST00000418882 TNFSF8P32971 234 aa4.86□□□□□ -1.63
HMGB1P49-201ENST00000418882 STAT1P42224 750 aa4.86□□□□□ -1.63
HMGB1P49-201ENST00000418882 POLD2P49005 469 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms