RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 STK40Q8N2I9 435 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 ACTL9Q8TC94 416 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 HELQQ8TDG4 1101 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 REXO5Q96IC2 774 aaKnown RBP11.4□□□□□ -0.58
PTCH1-205ENST00000418258 TCHHQ07283 1943 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 SAC3D1A6NKF1 404 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 EPN2O95208 641 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 NUP107P57740 925 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 MRPS6P82932 125 aaKnown RBP11.4□□□□□ -0.58
PTCH1-205ENST00000418258 KCNMA1Q12791 1236 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 DNAJC14Q6Y2X3 702 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-205ENST00000418258 R3HCC1LQ7Z5L2 792 aaKnown RBP11.4□□□□□ -0.58
PTCH1-205ENST00000418258 KCNF1Q9H3M0 494 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 RNPEPQ9H4A4 650 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 RAD21L1Q9H4I0 556 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 INPP4BO15327 924 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 CACTIN-AS1Q8N1I8 211 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 CYP2W1Q8TAV3 490 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 ATP13A3Q9H7F0 1226 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 GNPTGQ9UJJ9 305 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 ACKR2O00590 384 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 ADH1AP07327 375 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 EPORP19235 508 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 MCL1Q07820 350 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 DEFB106AQ8N104 65 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 TMEM120AQ9BXJ8 343 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 CDC42EP4Q9H3Q1 356 aaKnown RBP11.4□□□□□ -0.58
PTCH1-205ENST00000418258 NDUFAF1Q9Y375 327 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 IQGAP1P46940 1657 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 GSAPA4D1B5 854 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 SGTAO43765 313 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 LGALS2P05162 132 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 RPA3P35244 121 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-205ENST00000418258 RXRGP48443 463 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 SEC24CP53992 1094 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 FASTKQ14296 549 aaKnown RBP11.4□□□□□ -0.58
PTCH1-205ENST00000418258 CCNG2Q16589 344 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 PARGQ86W56 976 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 TINF2Q9BSI4 451 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 SLC4A5Q9BY07 1137 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 ARHGAP28Q9P2N2 729 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 LIMD1Q9UGP4 676 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 ANKRD6Q9Y2G4 727 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 USP32Q8NFA0 1604 aa11.4□□□□□ -0.58
PTCH1-205ENST00000418258 TRDMT1O14717 391 aaKnown RBP11.4□□□□□ -0.59
PTCH1-205ENST00000418258 FDPSP14324 419 aaKnown RBP11.4□□□□□ -0.59
PTCH1-205ENST00000418258 NPY2RP49146 381 aa11.4□□□□□ -0.59
PTCH1-205ENST00000418258 SERPINH1P50454 418 aaKnown RBP11.4□□□□□ -0.59
PTCH1-205ENST00000418258 KRR1Q13601 381 aaKnown RBP11.4□□□□□ -0.59
PTCH1-205ENST00000418258 PDZK1Q5T2W1 519 aa11.4□□□□□ -0.59
PTCH1-205ENST00000418258 SYT12Q8IV01 421 aa11.4□□□□□ -0.59
PTCH1-205ENST00000418258 POLR1BQ9H9Y6 1135 aa11.4□□□□□ -0.59
PTCH1-205ENST00000418258 ADPRHL2Q9NX46 363 aa11.4□□□□□ -0.59
PTCH1-205ENST00000418258 LYVE1Q9Y5Y7 322 aa11.4□□□□□ -0.59
PTCH1-205ENST00000418258 ADGRA3Q8IWK6 1321 aa11.4□□□□□ -0.59
PTCH1-205ENST00000418258 TRIM24O15164 1050 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF862O60290 1169 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 PGAM1P18669 254 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 BMPR2Q13873 1038 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 TRIM25Q14258 630 aaKnown RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 OTUD3Q5T2D3 398 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 FAAH2Q6GMR7 532 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 TTC7BQ86TV6 843 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 NOA1Q8NC60 698 aaKnown RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 STARD8Q92502 1023 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 BDH2Q9BUT1 245 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 PRRG4Q9BZD6 226 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 RAD23AP54725 363 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 SRSF11Q05519 484 aaKnown RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 TBCELQ5QJ74 424 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 FAM124AQ86V42 546 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 UROC1Q96N76 676 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 EPB41L4BQ9H329 900 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 NEUROD4Q9HD90 331 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 ARIH1Q9Y4X5 557 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 DGKAP23743 735 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 CD86P42081 329 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 RARRES1P49788 294 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 SLC6A3Q01959 620 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 HSPA14Q0VDF9 509 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 TRIM16LQ309B1 348 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 PLPP4Q5VZY2 271 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 WSCD1Q658N2 575 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 PRMT9Q6P2P2 845 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 FAM126BQ8IXS8 530 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 QRFPRQ96P65 431 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 SIKE1Q9BRV8 207 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 TCF7L2Q9NQB0 619 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 KLHL18O94889 574 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 NFKB1P19838 968 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF268Q14587 947 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 CDC73Q6P1J9 531 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 OTOP1Q7RTM1 612 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 MCOLN2Q8IZK6 566 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 RMND5BQ96G75 393 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 TBCDQ9BTW9 1192 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 POMKQ9H5K3 350 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 ASB8Q9H765 288 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms