RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 GOT1P17174 413 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 PLK1P53350 603 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 ECT2LQ008S8 904 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 GNA12Q03113 381 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 STARD3Q14849 445 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 TCEAL1Q15170 157 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 DPYSL2Q16555 572 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 RFX8Q6ZV50 586 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 PSTKQ8IV42 348 aaKnown RBP12.8□□□□□ -0.36
SKA1-203ENST00000417656 DCAF4L2Q8NA75 395 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 TEKT4Q8WW24 435 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 HMGB4Q8WW32 186 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 NELL1Q92832 810 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 ATOH1Q92858 354 aaPredicted RBP12.8□□□□□ -0.36
SKA1-203ENST00000417656 RPL10LQ96L21 214 aaKnown RBP12.8□□□□□ -0.36
SKA1-203ENST00000417656 TPSD1Q9BZJ3 242 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 TMEM245Q9H330 911 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 MTG2Q9H4K7 406 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 POLMQ9NP87 494 aaPredicted RBP12.8□□□□□ -0.36
SKA1-203ENST00000417656 ZSCAN32Q9NX65 697 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 BCCIPQ9P287 314 aaKnown RBP eCLIP12.8□□□□□ -0.36
SKA1-203ENST00000417656 LCMT1Q9UIC8 334 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 VPS51Q9UID3 782 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 PLA2G4CQ9UP65 541 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 R4GN57 208 aa12.8□□□□□ -0.36
SKA1-203ENST00000417656 CACNA1HO95180 2353 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 ILVBLA1L0T0 632 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 H3BRJ5 948 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 FGF10O15520 208 aaPredicted RBP12.79□□□□□ -0.36
SKA1-203ENST00000417656 SRPRAP08240 638 aaKnown RBP12.79□□□□□ -0.36
SKA1-203ENST00000417656 GABRG2P18507 467 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 GLDCP23378 1020 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 HOXA6P31267 233 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 HTR7P34969 479 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 ACVRL1P37023 503 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 NOP2P46087 812 aaKnown RBP12.79□□□□□ -0.36
SKA1-203ENST00000417656 VAV2P52735 878 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 ST8SIA6P61647 398 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 SULT2A1Q06520 285 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 SRSF5Q13243 272 aaKnown RBP12.79□□□□□ -0.36
SKA1-203ENST00000417656 E2F5Q15329 346 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 HADHQ16836 314 aaKnown RBP12.79□□□□□ -0.36
SKA1-203ENST00000417656 BOLA3Q53S33 107 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 ZNF783Q6ZMS7 281 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 KIAA1328Q86T90 577 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 WDR5BQ86VZ2 330 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 LONP2Q86WA8 852 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 RASSF3Q86WH2 238 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 CACUL1Q86Y37 369 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 CAMKK1Q8N5S9 505 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 SPON2Q9BUD6 331 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 FAM126AQ9BYI3 521 aaPredicted RBP12.79□□□□□ -0.36
SKA1-203ENST00000417656 SLC6A17Q9H1V8 727 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 GOLPH3Q9H4A6 298 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 CATSPERBQ9H7T0 1116 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 PCDH18Q9HCL0 1135 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 ATP13A1Q9HD20 1204 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 SLC25A13Q9UJS0 675 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 HYOU1Q9Y4L1 999 aa12.79□□□□□ -0.36
SKA1-203ENST00000417656 A0A0A6YYK5 440 aaPredicted RBP12.78□□□□□ -0.36
SKA1-203ENST00000417656 WASH4PA8MWX3 477 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 TTC34A8MYJ7 566 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 CBX4O00257 560 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 AXIN1O15169 862 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 SYNCRIPO60506 623 aaKnown RBP12.78□□□□□ -0.36
SKA1-203ENST00000417656 BUB1BO60566 1050 aaPredicted RBP12.78□□□□□ -0.36
SKA1-203ENST00000417656 RAMP2O60895 175 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 NDUFV2P19404 249 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 ARL4AP40617 200 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 ARHGAP25P42331 645 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 MRE11P49959 708 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 NRLP54845 237 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 HADHBP55084 474 aaKnown RBP12.78□□□□□ -0.36
SKA1-203ENST00000417656 CDH6P55285 790 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 KRT83P78385 493 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 NHLH1Q02575 133 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 DPYSQ14117 519 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 KRT81Q14533 505 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 IL31Q6EBC2 164 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 ZC3H14Q6PJT7 736 aaKnown RBP12.78□□□□□ -0.36
SKA1-203ENST00000417656 LINGO4Q6UY18 593 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 ZBTB44Q8NCP5 570 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 ARHGEF2Q92974 986 aaKnown RBP12.78□□□□□ -0.36
SKA1-203ENST00000417656 PPP1R9BQ96SB3 815 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 C2orf49Q9BVC5 232 aaPredicted RBP12.78□□□□□ -0.36
SKA1-203ENST00000417656 LACRTQ9GZZ8 138 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 IRF2BPLQ9H1B7 796 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 RETREG1Q9H6L5 497 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 NOL6Q9H6R4 1146 aaKnown RBP12.78□□□□□ -0.36
SKA1-203ENST00000417656 CWC15Q9P013 229 aaKnown RBP12.78□□□□□ -0.36
SKA1-203ENST00000417656 EBF1Q9UH73 591 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 SLCO3A1Q9UIG8 710 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 SALL4Q9UJQ4 1053 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 PCDHGA2Q9Y5H1 932 aa12.78□□□□□ -0.36
SKA1-203ENST00000417656 A0A0U1RQJ8 604 aa12.77□□□□□ -0.37
SKA1-203ENST00000417656 DAPK3O43293 454 aa12.77□□□□□ -0.37
SKA1-203ENST00000417656 BUB1O43683 1085 aa12.77□□□□□ -0.37
SKA1-203ENST00000417656 SPOPO43791 374 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms