RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 FAM46CQ5VWP2 391 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 OR6B2Q6IFH4 312 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 DHRS13Q6UX07 377 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.85□□□□□ -0.03
PAF1-202ENST00000416728 FAM183BPQ6ZVS7 135 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 C1orf131Q8NDD1 294 aaKnown RBP14.85□□□□□ -0.03
PAF1-202ENST00000416728 OR8D1Q8WZ84 308 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 SYNCQ9H7C4 482 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 KIAA1468Q9P260 1216 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 DKK4Q9UBT3 224 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 VANGL2Q9ULK5 521 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 RAXQ9Y2V3 346 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 FREM2Q5SZK8 3169 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 DMXL2Q8TDJ6 3036 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 TRABD2BA6NFA1 517 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 TLR4O00206 839 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 ENC1O14682 589 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 SLC7A4O43246 635 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 LATO43561 262 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 DAB1O75553 588 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 ERBB2P04626 1255 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 PON1P27169 355 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 KRT9P35527 623 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
PAF1-202ENST00000416728 METAP1P53582 386 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 SHBQ15464 509 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 NAPEPLDQ6IQ20 393 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 OLFML1Q6UWY5 402 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 PRPF39Q86UA1 669 aaKnown RBP14.85□□□□□ -0.03
PAF1-202ENST00000416728 SAP25Q8TEE9 199 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 FAM131CQ96AQ9 280 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 FEM1AQ9BSK4 669 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 KDM4CQ9H3R0 1056 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 VPS28Q9UK41 221 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 PCDHGA1Q9Y5H4 931 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 HS3ST4Q9Y661 456 aa14.85□□□□□ -0.03
PAF1-202ENST00000416728 C1QTNF3-AMACRE9PGA6 284 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 M0QYT0 321 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 PLK4O00444 970 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 ATP9BO43861 1147 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 RTN2O75298 545 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 PAGE1O75459 146 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 CLDN11O75508 207 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 LDOC1O95751 146 aaPredicted RBP14.84□□□□□ -0.03
PAF1-202ENST00000416728 EPHA8P29322 1005 aaPredicted RBP14.84□□□□□ -0.03
PAF1-202ENST00000416728 NOS2P35228 1153 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 NUDT1P36639 197 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 GGCXP38435 758 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 MTIF2P46199 727 aaKnown RBP14.84□□□□□ -0.03
PAF1-202ENST00000416728 IRAK1P51617 712 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 NXPH1P58417 271 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 CYP4F3Q08477 520 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 CAMK2BQ13554 666 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 COL9A2Q14055 689 aaPredicted RBP14.84□□□□□ -0.03
PAF1-202ENST00000416728 CAMK4Q16566 473 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 COL28A1Q2UY09 1125 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 SMYD5Q6GMV2 418 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 Q6ZVU0 165 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 SLC26A9Q7LBE3 791 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 OXR1Q8N573 874 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 PDCD7Q8N8D1 485 aaKnown RBP14.84□□□□□ -0.03
PAF1-202ENST00000416728 MFSD2AQ8NA29 543 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 OR52K2Q8NGK3 314 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 ALG14Q96F25 216 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 CNDP2Q96KP4 475 aaKnown RBP14.84□□□□□ -0.03
PAF1-202ENST00000416728 DNAJC12Q9UKB3 198 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 SARDHQ9UL12 918 aa14.84□□□□□ -0.03
PAF1-202ENST00000416728 CBX4O00257 560 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 ALOX15BO15296 676 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 PLRG1O43660 514 aaKnown RBP14.83□□□□□ -0.04
PAF1-202ENST00000416728 BNIP3LO60238 219 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 MAGEC1O60732 1142 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 ZNF18P17022 549 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 MAT2AP31153 395 aaKnown RBP14.83□□□□□ -0.04
PAF1-202ENST00000416728 SLC6A3Q01959 620 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 DLG2Q15700 870 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 TPD52L1Q16890 204 aaPredicted RBP14.83□□□□□ -0.04
PAF1-202ENST00000416728 POM121L1PQ3SYA9 428 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 PTPN20Q4JDL3 420 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 PDZD3Q86UT5 571 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 TMPRSS12Q86WS5 348 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 ZDHHC17Q8IUH5 632 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 EID2Q8N6I1 236 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 PIP4K2CQ8TBX8 421 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 SIK2Q9H0K1 926 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 MUC3BQ9H195 1237 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 ERVMER34-1Q9H9K5 563 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 RRN3Q9NYV6 651 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 PPM1HQ9ULR3 514 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 DMTF1Q9Y222 760 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 TBC1D30Q9Y2I9 924 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 OR51B4Q9Y5P0 310 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 PLXNB3Q9ULL4 1909 aa14.83□□□□□ -0.04
PAF1-202ENST00000416728 FOXN3O00409 490 aaPredicted RBP14.82□□□□□ -0.04
PAF1-202ENST00000416728 MCF2LO15068 1137 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 RFPL3O75679 317 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 C1SP09871 688 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 CDK4P11802 303 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 HNF1BP35680 557 aa14.82□□□□□ -0.04
PAF1-202ENST00000416728 RXRGP48443 463 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms