RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	YBEY	P58557	167 aa	Predicted RBP	13.49	□□□□□ -0.25
SF1-206	ENST00000413725	COPS2	P61201	443 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	MRPS21	P82921	87 aa	Known RBP	13.49	□□□□□ -0.25
SF1-206	ENST00000413725	POLD3	Q15054	466 aa	Predicted RBP	13.49	□□□□□ -0.25
SF1-206	ENST00000413725	PARP15	Q460N3	678 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	ANKRD20A8P	Q5CZ79	823 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	TRMT11	Q7Z4G4	463 aa	Known RBP	13.49	□□□□□ -0.25
SF1-206	ENST00000413725	ADIPOR2	Q86V24	386 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	ZNF354C	Q86Y25	554 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	SFTPA1	Q8IWL2	248 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	UMODL1-AS1	Q8N2C9	162 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	DCAF4L2	Q8NA75	395 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	OR52K2	Q8NGK3	314 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	EZH1	Q92800	747 aa	Predicted RBP	13.49	□□□□□ -0.25
SF1-206	ENST00000413725	TTC17	Q96AE7	1141 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	CLDN23	Q96B33	292 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	RNF25	Q96BH1	459 aa	Predicted RBP	13.49	□□□□□ -0.25
SF1-206	ENST00000413725	FAF2	Q96CS3	445 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	IER2	Q9BTL4	223 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.49	□□□□□ -0.25
SF1-206	ENST00000413725	PRDM16	Q9HAZ2	1276 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	ATP13A1	Q9HD20	1204 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	RBM12	Q9NTZ6	932 aa	Known RBP	13.49	□□□□□ -0.25
SF1-206	ENST00000413725	NDFIP2	Q9NV92	336 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	ELOVL2	Q9NXB9	296 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	HPCAL4	Q9UM19	191 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	STARD13	Q9Y3M8	1113 aa		13.49	□□□□□ -0.25
SF1-206	ENST00000413725	ARHGAP42	A6NI28	874 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	C3orf70	A6NLC5	250 aa	Predicted RBP	13.48	□□□□□ -0.25
SF1-206	ENST00000413725	ZFX	P17010	805 aa	Predicted RBP	13.48	□□□□□ -0.25
SF1-206	ENST00000413725	IL4R	P24394	825 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	TIE1	P35590	1138 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	TFDP2	Q14188	446 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	RPS6KA1	Q15418	735 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	HSF5	Q4G112	596 aa	Predicted RBP	13.48	□□□□□ -0.25
SF1-206	ENST00000413725	HS1BP3	Q53T59	392 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	TFDP3	Q5H9I0	405 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	TMEM215	Q68D42	235 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	IL31	Q6EBC2	164 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	SPOCD1	Q6ZMY3	1216 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	RFX6	Q8HWS3	928 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	APCDD1	Q8J025	514 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	FBXL6	Q8N531	539 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.48	□□□□□ -0.25
SF1-206	ENST00000413725	OR7D4	Q8NG98	312 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	PCDH19	Q8TAB3	1148 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	ARHGEF2	Q92974	986 aa	Known RBP	13.48	□□□□□ -0.25
SF1-206	ENST00000413725	ACD	Q96AP0	544 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	ALG14	Q96F25	216 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	HES6	Q96HZ4	224 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	RNF157	Q96PX1	679 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	SPON2	Q9BUD6	331 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	SLC25A13	Q9UJS0	675 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	INTS6	Q9UL03	887 aa	Known RBP	13.48	□□□□□ -0.25
SF1-206	ENST00000413725	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.48	□□□□□ -0.25
SF1-206	ENST00000413725	PLA2G4C	Q9UP65	541 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725	OR51B4	Q9Y5P0	310 aa		13.48	□□□□□ -0.25
SF1-206	ENST00000413725		A0A0D9SEW6	157 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	USP27X	A6NNY8	438 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	RASA4B	C9J798	803 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	APOL1	O14791	398 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	RASA4	O43374	803 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	ATG13	O75143	517 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	DCN	P07585	359 aa	Known RBP	13.47	□□□□□ -0.25
SF1-206	ENST00000413725	SRPRA	P08240	638 aa	Known RBP	13.47	□□□□□ -0.25
SF1-206	ENST00000413725	DLD	P09622	509 aa	Known RBP	13.47	□□□□□ -0.25
SF1-206	ENST00000413725	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
SF1-206	ENST00000413725	NNMT	P40261	264 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	CDKN2B	P42772	138 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	KIR2DL1	P43626	348 aa	Predicted RBP	13.47	□□□□□ -0.25
SF1-206	ENST00000413725	PEX5	P50542	639 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	DNA2	P51530	1060 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	ST8SIA6	P61647	398 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	ECT2L	Q008S8	904 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	FZD5	Q13467	585 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	PPP2R5E	Q16537	467 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	FNDC3B	Q53EP0	1204 aa	Known RBP	13.47	□□□□□ -0.25
SF1-206	ENST00000413725	C2orf27A	Q580R0	203 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	ZNF569	Q5MCW4	686 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	MEI1	Q5TIA1	1274 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	EGFLAM	Q63HQ2	1017 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	SDE2	Q6IQ49	451 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	RETSAT	Q6NUM9	610 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	MFSD7	Q6UXD7	560 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	CHPF	Q8IZ52	775 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	RPLP0P6	Q8NHW5	317 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	USP33	Q8TEY7	942 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	CYB5D2	Q8WUJ1	264 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	SORCS1	Q8WY21	1168 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	C1QTNF1	Q9BXJ1	281 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	CHRD	Q9H2X0	955 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	NOL6	Q9H6R4	1146 aa	Known RBP	13.47	□□□□□ -0.25
SF1-206	ENST00000413725	LRRC19	Q9H756	370 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	KCND1	Q9NSA2	647 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	ERVW-1	Q9UQF0	538 aa		13.47	□□□□□ -0.25
SF1-206	ENST00000413725	SPAG17	Q6Q759	2223 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	FAM86C2P	A6NEL3	165 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.46	□□□□□ -0.25
SF1-206	ENST00000413725	CBX4	O00257	560 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	DDX3Y	O15523	660 aa	Known RBP	13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms