RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 TBC1D3Q8IZP1 549 aaPredicted RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 EXT2Q93063 718 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 MYCBPQ99417 103 aaPredicted RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 DCLK3Q9C098 648 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 HEBP1Q9NRV9 189 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 NDFIP2Q9NV92 336 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 NOVA2Q9UNW9 492 aaKnown RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 TRAF3IP3Q9Y228 551 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 DERAQ9Y315 318 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 SPEF1Q9Y4P9 236 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 CPQQ9Y646 472 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 CBX4O00257 560 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 IL1BP01584 269 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 EPHX1P07099 455 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 HNRNPA1P09651 372 aaKnown RBP eCLIP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 CYP3A5P20815 502 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 GTF2A1P52655 376 aaPredicted RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 CSE1LP55060 971 aaKnown RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 SELENOVP59797 346 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 BST2Q10589 180 aaKnown RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 NNTQ13423 1086 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 SMTNL2Q2TAL5 461 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 SLC44A4Q53GD3 710 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 RTP2Q5QGT7 225 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 PPP1R2P3Q6NXS1 205 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 PIGWQ7Z7B1 504 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 TRIM42Q8IWZ5 723 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 TOP6BLQ8N6T0 577 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 FAM71BQ8TC56 605 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 GRIN3AQ8TCU5 1115 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 PIGKQ92643 395 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 SERPINI1Q99574 410 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 ADAM33Q9BZ11 813 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 DPEP3Q9H4B8 488 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 EPS8L2Q9H6S3 715 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 CASS4Q9NQ75 786 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 ZC3H7BQ9UGR2 993 aaKnown RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 IP6K2Q9UHH9 426 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 C5orf58C9J3I9 102 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 RTN2O75298 545 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 RHOBTB1O94844 696 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 ZRANB2O95218 330 aaKnown RBP eCLIP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 KLF8O95600 359 aaPredicted RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 ADH5P11766 374 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 PSMC3P17980 439 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 GALCP54803 685 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 RPP38P78345 283 aaKnown RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 POLD3Q15054 466 aaPredicted RBP5.93□□□□□ -1.46
PRDM2-206ENST00000413440 EOGTQ5NDL2 527 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 C6orf132Q5T0Z8 1188 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 ARHGEF19Q8IW93 802 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 AGGF1Q8N302 714 aaeCLIP5.93□□□□□ -1.463e-6■■□□□ 14
PRDM2-206ENST00000413440 USP33Q8TEY7 942 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 VPS39Q96JC1 886 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 PDLIM2Q96JY6 352 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 HHIPQ96QV1 700 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 ZNF518BQ9C0D4 1074 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 IKZF4Q9H2S9 585 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 PARVAQ9NVD7 372 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 MARCH2Q9P0N8 246 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 NENFQ9UMX5 172 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 ZNF232Q9UNY5 417 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 HPSEQ9Y251 543 aa5.93□□□□□ -1.46
PRDM2-206ENST00000413440 A0A087X0T9 212 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 EXOC1LA0A1B0GW35 172 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 KERAO60938 352 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 KRT8P05787 483 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 SMARCB1Q12824 385 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 CASP8Q14790 479 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 TXNDC8Q6A555 127 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 TRIM72Q6ZMU5 477 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 BZW1Q7L1Q6 419 aaKnown RBP5.92□□□□□ -1.46
PRDM2-206ENST00000413440 TBC1D1Q86TI0 1168 aaPredicted RBP5.92□□□□□ -1.46
PRDM2-206ENST00000413440 COLGALT2Q8IYK4 626 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 FBXL16Q8N461 479 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 FRS2Q8WU20 508 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 SUSD3Q96L08 255 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 NUSAP1Q9BXS6 441 aaKnown RBP5.92□□□□□ -1.46
PRDM2-206ENST00000413440 ZDHHC6Q9H6R6 413 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 CAPN10Q9HC96 672 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 CISHQ9NSE2 258 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 WHRNQ9P202 907 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 KLHL8Q9P2G9 620 aaPredicted RBP5.92□□□□□ -1.46
PRDM2-206ENST00000413440 MRFAP1Q9Y605 127 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 COL11A1P12107 1806 aaPredicted RBP5.92□□□□□ -1.46
PRDM2-206ENST00000413440 H3BM21 787 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 ZBTB22O15209 634 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 ADSLP30566 484 aaPredicted RBP5.92□□□□□ -1.46
PRDM2-206ENST00000413440 GAD2Q05329 585 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 SPIRE1Q08AE8 756 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 USP4Q13107 963 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 SCGB2A2Q13296 93 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 SMU1Q2TAY7 513 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 EDRF1Q3B7T1 1238 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 KLHL35Q6PF15 583 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 DSELQ8IZU8 1212 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 LIX1Q8N485 282 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 MCUR1Q96AQ8 359 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 GUCD1Q96NT3 240 aa5.92□□□□□ -1.46
PRDM2-206ENST00000413440 RTP3Q9BQQ7 232 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms