RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CEACAM7Q14002 265 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 LILRA2Q8N149 483 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 ZNF567Q8N184 647 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 GRIP2Q9C0E4 1043 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 IL22Q9GZX6 179 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 SMARCAD1Q9H4L7 1026 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 COPS7BQ9H9Q2 264 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-202ENST00000413219 PREBQ9HCU5 417 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 FAM49BQ9NUQ9 324 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 GALNT8Q9NY28 637 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 ANKRD6Q9Y2G4 727 aa17.99■□□□□ 0.47
SDCBP-202ENST00000413219 C2P06681 752 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 FAM200BP0CF97 657 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 MPSTP25325 297 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 PPM1LQ5SGD2 360 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 CES3Q6UWW8 571 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 ZYG11AQ6WRX3 759 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 LBX2Q6XYB7 198 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 UNC93AQ86WB7 457 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 CNTD1Q8N815 330 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 BHLHE22Q8NFJ8 381 aaPredicted RBP17.98■□□□□ 0.47
SDCBP-202ENST00000413219 PDCD6IPQ8WUM4 868 aaKnown RBP17.98■□□□□ 0.47
SDCBP-202ENST00000413219 ZNF669Q96BR6 464 aaPredicted RBP17.98■□□□□ 0.47
SDCBP-202ENST00000413219 RCN3Q96D15 328 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 AGAP3Q96P47 875 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 MRPL45Q9BRJ2 306 aaKnown RBP17.98■□□□□ 0.47
SDCBP-202ENST00000413219 WDR55Q9H6Y2 383 aaPredicted RBP17.98■□□□□ 0.47
SDCBP-202ENST00000413219 WDR41Q9HAD4 459 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 EFCAB1Q9HAE3 211 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.98■□□□□ 0.47
SDCBP-202ENST00000413219 A0A0G2JMZ2 1700 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 LRRC37A2A6NM11 1700 aa17.98■□□□□ 0.47
SDCBP-202ENST00000413219 GOLGA8QA0A0J9YX86 632 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 E2F8A0AVK6 867 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 GOLGA8OA6NCC3 632 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 CCDC160A6NGH7 325 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 GOLGA8NF8WBI6 632 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 ARIH2O95376 493 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 BST2Q10589 180 aaKnown RBP17.97■□□□□ 0.47
SDCBP-202ENST00000413219 MYBPC3Q14896 1274 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 SOWAHAQ2M3V2 549 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 SH3D19Q5HYK7 790 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 LIPMQ5VYY2 423 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 TMEM102Q8N9M5 508 aaPredicted RBP17.97■□□□□ 0.47
SDCBP-202ENST00000413219 CATSPER2Q96P56 530 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 PKP2Q99959 881 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 MCMBPQ9BTE3 642 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 BFARQ9NZS9 450 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 PACSIN3Q9UKS6 424 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 ZCWPW2A0A1B0GU75 182 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 GRID2O43424 1007 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 CABYRO75952 493 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 C22orf31O95567 290 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 LTFP02788 710 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 CCDC166P0CW27 439 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 DNAJB1P25685 340 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 ACADSBP45954 432 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 CSRP3P50461 194 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 IRF9Q00978 393 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 MS4A2Q01362 244 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 PAFAH1B3Q15102 231 aaKnown RBP17.97■□□□□ 0.47
SDCBP-202ENST00000413219 PYROXD2Q8N2H3 581 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 GFM2Q969S9 779 aaKnown RBP17.97■□□□□ 0.47
SDCBP-202ENST00000413219 PRPF18Q99633 342 aaKnown RBP17.97■□□□□ 0.47
SDCBP-202ENST00000413219 ACE2Q9BYF1 805 aaPredicted RBP17.97■□□□□ 0.47
SDCBP-202ENST00000413219 ZBTB26Q9HCK0 441 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 APPL1Q9UKG1 709 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 PCDHGB4Q9UN71 923 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 CDYLQ9Y232 598 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 PCDHGB5Q9Y5G0 923 aa17.97■□□□□ 0.47
SDCBP-202ENST00000413219 ACOT8O14734 319 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 AP2A1O95782 977 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 CHRNGP07510 517 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 ATP6V1B1P15313 513 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 NSUN2Q08J23 767 aaKnown RBP eCLIP17.96■□□□□ 0.47
SDCBP-202ENST00000413219 ART3Q13508 389 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 DPYSQ14117 519 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 OR52K1Q8NGK4 314 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 CLEC4CQ8WTT0 213 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 MPHOSPH6Q99547 160 aaKnown RBP17.96■□□□□ 0.47
SDCBP-202ENST00000413219 HAUS8Q9BT25 410 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 CASS4Q9NQ75 786 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 SEPT10Q9P0V9 454 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 VANGL2Q9ULK5 521 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 SNX9Q9Y5X1 595 aa17.96■□□□□ 0.47
SDCBP-202ENST00000413219 MAGEB16A2A368 324 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 HNRNPRO43390 633 aaKnown RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 CAPN15O75808 1086 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 CD1EP15812 388 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 ARF4P18085 180 aaPredicted RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 TFEBP19484 476 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 EPHA3P29320 983 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 BCAT1P54687 386 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 PKNOX1P55347 436 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 CDKL1Q00532 357 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 MPP3Q13368 585 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 C6orf52Q5T4I8 152 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 IYDQ6PHW0 289 aa17.95■□□□□ 0.46
SDCBP-202ENST00000413219 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
SDCBP-202ENST00000413219 EEPD1Q7L9B9 569 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms