RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 BRSK2Q8IWQ3 736 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 TMEM217Q8N7C4 229 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 C16orf52Q8NHV5 167 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 PIGOQ8TEQ8 1089 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 VOPP1Q96AW1 172 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 MSI2Q96DH6 328 aaKnown RBP4.38□□□□□ -1.71
CLHC1-205ENST00000411884 CTDSP1Q9GZU7 261 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 ACAD9Q9H845 621 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 TMEM160Q9NX00 188 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 ZNF70Q9UC06 446 aaPredicted RBP4.38□□□□□ -1.71
CLHC1-205ENST00000411884 GJD2Q9UKL4 321 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 AGO2Q9UKV8 859 aaKnown RBP4.38□□□□□ -1.71
CLHC1-205ENST00000411884 SLC8A2Q9UPR5 921 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 LAMP3Q9UQV4 416 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.38□□□□□ -1.71
CLHC1-205ENST00000411884 LRRFIP2Q9Y608 721 aaKnown RBP4.38□□□□□ -1.71
CLHC1-205ENST00000411884 ZMYM2Q9UBW7 1377 aa4.38□□□□□ -1.71
CLHC1-205ENST00000411884 A0A0G2JK05 382 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 RHODO00212 210 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 SYN3O14994 580 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 KLK10O43240 276 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 MSI1O43347 362 aaKnown RBP4.37□□□□□ -1.71
CLHC1-205ENST00000411884 PYGLP06737 847 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 POLBP06746 335 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 TNNT1P13805 278 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 GSTM2P28161 218 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 STAT1P42224 750 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 UBE3AQ05086 875 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 SRSF1Q07955 248 aaKnown RBP eCLIP4.37□□□□□ -1.71
CLHC1-205ENST00000411884 GALNT3Q14435 633 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 PLK5Q496M5 336 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 RUNDC3AQ59EK9 446 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 ASPHD1Q5U4P2 390 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 ISM2Q6H9L7 571 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 ANKRD13BQ86YJ7 626 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.37□□□□□ -1.712e-8■□□□□ 9.2
CLHC1-205ENST00000411884 DDIASQ8IXT1 998 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 ANKRD44Q8N8A2 993 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 USP13Q92995 863 aaPredicted RBP4.37□□□□□ -1.71
CLHC1-205ENST00000411884 RPL36ALQ969Q0 106 aaKnown RBP4.37□□□□□ -1.71
CLHC1-205ENST00000411884 EME1Q96AY2 570 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 RNFT2Q96EX2 444 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 CLMNQ96JQ2 1002 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 MAELQ96JY0 434 aaKnown RBP4.37□□□□□ -1.71
CLHC1-205ENST00000411884 TUBB6Q9BUF5 446 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 SPRTNQ9H040 489 aaPredicted RBP4.37□□□□□ -1.71
CLHC1-205ENST00000411884 ZNF304Q9HCX3 659 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 SPAG4Q9NPE6 437 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 THSD1Q9NS62 852 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 TRNAU1APQ9NX07 287 aaKnown RBP4.37□□□□□ -1.71
CLHC1-205ENST00000411884 TUBA8Q9NY65 449 aaPredicted RBP4.37□□□□□ -1.71
CLHC1-205ENST00000411884 HDAC6Q9UBN7 1215 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 UPB1Q9UBR1 384 aa4.37□□□□□ -1.71
CLHC1-205ENST00000411884 ZNF335Q9H4Z2 1342 aaPredicted RBP4.37□□□□□ -1.71
CLHC1-205ENST00000411884 CCDC189A1A4V9 331 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 DPPA5A6NC42 116 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 RRN3P2A6NIE6 340 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 FOXO6A8MYZ6 492 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 ZNF814B7Z6K7 855 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 PRPF4O43172 522 aaKnown RBP eCLIP4.36□□□□□ -1.71
CLHC1-205ENST00000411884 TSPAN3O60637 253 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 HLA-DQA2P01906 255 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 CIITAP33076 1130 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 MTNR1AP48039 350 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 ARHGAP8P85298 464 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 TLE2Q04725 743 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 MTX1Q13505 466 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 BYSLQ13895 437 aaKnown RBP4.36□□□□□ -1.71
CLHC1-205ENST00000411884 ETFDHQ16134 617 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 SMTNL2Q2TAL5 461 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 SH2D4BQ5SQS7 431 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 PIK3CD-AS1Q5SR53 167 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 C11orf87Q6NUJ2 197 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 SHC4Q6S5L8 630 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 CYB5R4Q7L1T6 521 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 SLC44A5Q8NCS7 719 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 ZFYVE19Q96K21 471 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 CHMP4AQ9BY43 222 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 STN1Q9H668 368 aaKnown RBP4.36□□□□□ -1.71
CLHC1-205ENST00000411884 AAMDCQ9H7C9 122 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 MSRB1Q9NZV6 116 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 HEY2Q9UBP5 337 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 GDAQ9Y2T3 454 aa4.36□□□□□ -1.71
CLHC1-205ENST00000411884 A0A1W2PPC1 479 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 FAM90A7PA6NKC0 464 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 FAM90A22PA8MWA6 464 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 FAM90A12PA8MX19 464 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 FAM90A23PA8MXZ1 464 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 CCNT1O60563 726 aaKnown RBP4.35□□□□□ -1.71
CLHC1-205ENST00000411884 FGBP02675 491 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 LCKP06239 509 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 FCGR2AP12318 317 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 PRF1P14222 555 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 CHRNA5P30532 468 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 GJC1P36383 396 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 MMP13P45452 471 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 PMPCAQ10713 525 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 DLGAP5Q15398 846 aa4.35□□□□□ -1.71
CLHC1-205ENST00000411884 RBMS2Q15434 407 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms