RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 OBSL1O75147 1896 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 ESPL1Q14674 2120 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 BOD1L1Q8NFC6 3051 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 RP1P56715 2156 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ITIH6Q6UXX5 1313 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CKAP5Q14008 2032 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 MUC22E2RYF6 1773 aaPredicted RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 UNC13CQ8NB66 2214 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SPTY2D1-AS1A0A0U1RR47 76 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 GOLGA6L7A0A1B0GV03 622 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 A0A1W2PQ27 194 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 A0A1W2PQ64 194 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 A0A1W2PQC6 194 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 A0A1W2PQU0 124 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PMS2P1A4D2B8 440 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 A6NNZ2 444 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 LRRIQ3A6PVS8 624 aaPredicted RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 IKBKBO14920 756 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 MCF2LO15068 1137 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 MUSKO15146 869 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ALOX15BO15296 676 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TGFB1I1O43294 461 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 AQP9O43315 295 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 MSI1O43347 362 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ACSL4O60488 711 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 AGFG2O95081 481 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 LUC7L3O95232 432 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 VNN1O95497 513 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ASS1P00966 412 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 C4BPAP04003 597 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CSF2P04141 144 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ANXA6P08133 673 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 JMJD7P0C870 316 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 NME1P15531 152 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZNF18P17022 549 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 JUNDP17535 347 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CD58P19256 250 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CD82P27701 267 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC6A4P31645 630 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 NOS2P35228 1153 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 HOXD13P35453 343 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 UGT1A5P35504 534 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CTSOP43234 321 aaPredicted RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CASP4P49662 377 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SGSHP51688 502 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 OXCT1P55809 520 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TBX4P57082 545 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLDN2P57739 230 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 RPS24P62847 133 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CYP4F2P78329 520 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLDN10P78369 228 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 NUCB2P80303 420 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 AMPD3Q01432 767 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SULT2A1Q06520 285 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CNTN1Q12860 1018 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SRSF6Q13247 344 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 KCNAB2Q13303 367 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC12A1Q13621 1099 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 FZD2Q14332 565 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLCA4Q14CN2 919 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 KNOP1Q1ED39 458 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 DEFB133Q30KQ1 61 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ACCSLQ4AC99 568 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZNF394Q53GI3 561 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 FSCBQ5H9T9 825 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 RAB41Q5JT25 222 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 FAM26FQ5R3K3 315 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PPP1R26Q5T8A7 1209 aaPredicted RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TMEM164Q5U3C3 297 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 AGBL4Q5VU57 503 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 BSPRYQ5W0U4 402 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PM20D1Q6GTS8 502 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SPOPLQ6IQ16 392 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ESRP1Q6NXG1 681 aaKnown RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 BORAQ6PGQ7 559 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CRTC1Q6UUV9 634 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 GCNT7Q6ZNI0 430 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 MMS22LQ6ZRQ5 1243 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 Q6ZSR6 202 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SV2AQ7L0J3 742 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 BRAPQ7Z569 592 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ABI3BPQ7Z7G0 1075 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 VASH2Q86V25 355 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 PARGQ86W56 976 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 HORMAD1Q86X24 394 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 DTX1Q86Y01 620 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 NELFCDQ8IXH7 590 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 C12orf56Q8IXR9 622 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 SIX6OS1Q8N1H7 587 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TTC39CQ8N584 583 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ANKRD52Q8NB46 1076 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCDC150Q8NCX0 1101 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZNF548Q8NEK5 533 aaPredicted RBP2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 OR13H1Q8NG92 308 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 GOLGA5Q8TBA6 731 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 TMC2Q8TDI7 906 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 LMX1AQ8TE12 382 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 BTN2A2Q8WVV5 523 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 KCTD13Q8WZ19 329 aa2.44□□□□□ -2.02
RNU4-53P-201ENST00000410828 EDEM1Q92611 657 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms