RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.35
CHMP3-203ENST00000409225 LGI2Q8N0V4 545 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 MAPK15Q8TD08 544 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 FOXD4L4Q8WXT5 416 aaPredicted RBP17.21■□□□□ 0.35
CHMP3-203ENST00000409225 EEF2KMTQ96G04 330 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 CALN1Q9BXU9 219 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 KLHL11Q9NVR0 708 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 HEMK1Q9Y5R4 338 aaPredicted RBP17.21■□□□□ 0.35
CHMP3-203ENST00000409225 LY6G6EA0A0G2JKS1 128 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 O00370 1275 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 SLC31A1O15431 190 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 PIAS2O75928 621 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 GP1BAP07359 652 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 PRLRP16471 622 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 NFATC3Q12968 1075 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 NFIL3Q16649 462 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 FAM46CQ5VWP2 391 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 IFI44Q8TCB0 444 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 OR8D1Q8WZ84 308 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 IRGQQ8WZA9 623 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 FAM117AQ9C073 453 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 FZD3Q9NPG1 666 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 NLGN3Q9NZ94 848 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 XPO7Q9UIA9 1087 aaKnown RBP17.2■□□□□ 0.34
CHMP3-203ENST00000409225 MAPK8IP1Q9UQF2 711 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 SSUH2Q9Y2M2 353 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 U3KQA8 63 aa17.2■□□□□ 0.34
CHMP3-203ENST00000409225 TDRD6O60522 2096 aaKnown RBP17.19■□□□□ 0.34
CHMP3-203ENST00000409225 A0A1W2PNU3 283 aaPredicted RBP17.19■□□□□ 0.34
CHMP3-203ENST00000409225 RNGTTO60942 597 aaKnown RBP17.19■□□□□ 0.34
CHMP3-203ENST00000409225 VDRP11473 427 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 PDGFRAP16234 1089 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 DUSP3P51452 185 aaPredicted RBP17.19■□□□□ 0.34
CHMP3-203ENST00000409225 ADAM9Q13443 819 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 ISXQ2M1V0 245 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 ACCSLQ4AC99 568 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 RAP1GAP2Q684P5 730 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 PMF1Q6P1K2 205 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 FOXR1Q6PIV2 292 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 CCDC81Q6ZN84 652 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 DSG4Q86SJ6 1040 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 CHSY1Q86X52 802 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 TMEM145Q8NBT3 493 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 OR13H1Q8NG92 308 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 DQX1Q8TE96 717 aaKnown RBP17.19■□□□□ 0.34
CHMP3-203ENST00000409225 FRS2Q8WU20 508 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 ATXN7L3BQ96GX2 97 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 WDR70Q9NW82 654 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 IL17BQ9UHF5 180 aa17.19■□□□□ 0.34
CHMP3-203ENST00000409225 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
CHMP3-203ENST00000409225 ZNF18P17022 549 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 TGM2P21980 687 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 RPL13P26373 211 aaKnown RBP17.18■□□□□ 0.34
CHMP3-203ENST00000409225 NUCB2P80303 420 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 SRSF1Q07955 248 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHMP3-203ENST00000409225 CUL2Q13617 745 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 ZSCAN23Q3MJ62 389 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 ZNF542PQ5EBM4 170 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 IGF2-ASQ6U949 168 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 CIR1Q86X95 450 aaPredicted RBP17.18■□□□□ 0.34
CHMP3-203ENST00000409225 LURAP1LQ8IV03 231 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 CCDC97Q96F63 343 aaPredicted RBP17.18■□□□□ 0.34
CHMP3-203ENST00000409225 INTS4Q96HW7 963 aaKnown RBP17.18■□□□□ 0.34
CHMP3-203ENST00000409225 SLC46A1Q96NT5 459 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 SERPINB11Q96P15 392 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 MIS12Q9H081 205 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 PREBQ9HCU5 417 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 EVA1BQ9NVM1 165 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 TJP2Q9UDY2 1190 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 TLR6Q9Y2C9 796 aa17.18■□□□□ 0.34
CHMP3-203ENST00000409225 A0A1W2PQU0 124 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 PMS2P1A4D2B8 440 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 C1QTNF3-AMACRE9PGA6 284 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 K7ESM1 405 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 NEBLO76041 1014 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 TACR2P21452 398 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 CLDN2P57739 230 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 TAS2R38P59533 333 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 YWHAEP62258 255 aaKnown RBP17.17■□□□□ 0.34
CHMP3-203ENST00000409225 SULT2A1Q06520 285 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 PTPN13Q12923 2485 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 C6orf132Q5T0Z8 1188 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 LCLAT1Q6UWP7 414 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 EXD3Q8N9H8 876 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 SLC35F5Q8WV83 523 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 TFAP2BQ92481 460 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 SLC39A13Q96H72 371 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 NOX5Q96PH1 765 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 USP29Q9HBJ7 922 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 DNAJC28Q9NX36 388 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 PPM1HQ9ULR3 514 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 NAALADL1Q9UQQ1 740 aa17.17■□□□□ 0.34
CHMP3-203ENST00000409225 CPED1A4D0V7 1026 aa17.16■□□□□ 0.34
CHMP3-203ENST00000409225 NEMP2A6NFY4 417 aa17.16■□□□□ 0.34
CHMP3-203ENST00000409225 M0QYV0 167 aa17.16■□□□□ 0.34
CHMP3-203ENST00000409225 SCAMP1O15126 338 aa17.16■□□□□ 0.34
CHMP3-203ENST00000409225 BNIP3LO60238 219 aa17.16■□□□□ 0.34
CHMP3-203ENST00000409225 STX10O60499 249 aa17.16■□□□□ 0.34
CHMP3-203ENST00000409225 APOEP02649 317 aa17.16■□□□□ 0.34
CHMP3-203ENST00000409225 FYNP06241 537 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms