RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 SPG21Q9NZD8 308 aa29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 GJB5O95377 273 aa29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 SOD2P04179 222 aa29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 C10orf120Q5SQS8 335 aa29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 AFMIDQ63HM1 303 aa29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 SH2D5Q6ZV89 423 aa29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 OTOP3Q7RTS5 596 aa29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 RTL3Q8N8U3 475 aaKnown RBP29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 ELAC2Q9BQ52 826 aaKnown RBP29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 OXCT2Q9BYC2 517 aaPredicted RBP29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 VANGL2Q9ULK5 521 aa29.63■■■□□ 2.33
CSNK1E-205ENST00000405675 GREB1Q4ZG55 1949 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 ARHGAP42A6NI28 874 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 SLC2A3P11169 496 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 CCNCP24863 283 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 IL9RQ01113 521 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 MS4A13Q5J8X5 152 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 ITPRIPL1Q6GPH6 555 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 C2orf15Q8WU43 125 aaKnown RBP29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 MARCH2Q9P0N8 246 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 ZNF180Q9UJW8 692 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 LAMA2P24043 3122 aaKnown RBP29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 SLC38A8A6NNN8 435 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 MAFKO60675 156 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 HMBSP08397 361 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 TAC1P20366 129 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 OR1D2P34982 312 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 ZNF33AQ06730 810 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 TRIP4Q15650 581 aaPredicted RBP29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 TTC39BQ5VTQ0 682 aaPredicted RBP29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 SLC8B1Q6J4K2 584 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 LZTR1Q8N653 840 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 CCSER2Q9H7U1 834 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 GGA2Q9UJY4 613 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 BACE2Q9Y5Z0 518 aa29.62■■■□□ 2.33
CSNK1E-205ENST00000405675 TRIM49D1C9J1S8 452 aa29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 ALDH1A2O94788 518 aa29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 PGAM1P18669 254 aa29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 RPL10AP62906 217 aaKnown RBP29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 IFT88Q13099 833 aa29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 NUGGCQ68CJ6 796 aa29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 SPATS2Q86XZ4 545 aaKnown RBP29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 NOL6Q9H6R4 1146 aaKnown RBP29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 UBP1Q9NZI7 540 aa29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 SLC17A6Q9P2U8 582 aa29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 MAGED2Q9UNF1 606 aaPredicted RBP29.61■■■□□ 2.33
CSNK1E-205ENST00000405675 ZDHHC11BP0C7U3 371 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 CCNB1P14635 433 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 GBP2P32456 591 aaPredicted RBP29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 PSEN1P49768 467 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 APOL2Q9BQE5 337 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 CLSTN3Q9BQT9 956 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 ZBED2Q9BTP6 218 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 CASS4Q9NQ75 786 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 SLC12A8A0AV02 714 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 HTRA4P83105 476 aaPredicted RBP29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 BMPR2Q13873 1038 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 CRYMQ14894 314 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 ZKSCAN8Q15776 578 aaPredicted RBP29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 CES3Q6UWW8 571 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 TCP10LQ8TDR4 215 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 COMMD8Q9NX08 183 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 SLC17A7Q9P2U7 560 aa29.6■■■□□ 2.33
CSNK1E-205ENST00000405675 WASH4PA8MWX3 477 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 PYGBP11216 843 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 LVRNQ6Q4G3 990 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 MICALCLQ6ZW33 695 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 CYS1Q717R9 158 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 OLA1Q9NTK5 396 aaKnown RBP29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 CNTN5O94779 1100 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 PAPOLAP51003 745 aaKnown RBP29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 DSG1Q02413 1049 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 SLC18A2Q05940 514 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 TFAP2DQ7Z6R9 452 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 SPOCK2Q92563 424 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 CABS1Q96KC9 395 aa29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 NSRP1Q9H0G5 558 aaKnown RBP29.59■■■□□ 2.33
CSNK1E-205ENST00000405675 HMX2A2RU54 273 aa29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 ZWINTO95229 277 aa29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 IGLV3-27P01718 113 aa29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 SNRPAP09012 282 aaKnown RBP29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 SMAD1Q15797 465 aaKnown RBP29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 ALFQ53S48 1182 aa29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 PSRC1Q6PGN9 363 aaPredicted RBP29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 DDX53Q86TM3 631 aaKnown RBP29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 CCDC197Q8NCU1 140 aa29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 ALKBH8Q96BT7 664 aaKnown RBP29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 IL12RB2Q99665 862 aa29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 HERC2P3Q9BVR0 1158 aa29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 TMEM51Q9NW97 253 aa29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 NYNRINQ9P2P1 1898 aaKnown RBP29.58■■■□□ 2.33
CSNK1E-205ENST00000405675 ERI2A8K979 691 aaKnown RBP29.57■■■□□ 2.32
CSNK1E-205ENST00000405675 MATN3O15232 486 aa29.57■■■□□ 2.32
CSNK1E-205ENST00000405675 CACNG3O60359 315 aa29.57■■■□□ 2.32
CSNK1E-205ENST00000405675 ADRA1DP25100 572 aa29.57■■■□□ 2.32
CSNK1E-205ENST00000405675 NIPAL4Q0D2K0 466 aa29.57■■■□□ 2.32
CSNK1E-205ENST00000405675 HHATQ5VTY9 493 aa29.57■■■□□ 2.32
CSNK1E-205ENST00000405675 CCNJLQ8IV13 435 aa29.57■■■□□ 2.32
CSNK1E-205ENST00000405675 FIBCD1Q8N539 461 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms