RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 PENKP01210 267 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-204ENST00000405578 L1CAMP32004 1257 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 NRG1Q02297 640 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-204ENST00000405578 GRSF1Q12849 480 aaKnown RBP eCLIP10.86□□□□□ -0.67
RPAIN-204ENST00000405578 CDH18Q13634 790 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 E2F5Q15329 346 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 COL28A1Q2UY09 1125 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 NADSYN1Q6IA69 706 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 C11orf63Q6NUN7 778 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 RWDD4Q6NW29 188 aaKnown RBP10.86□□□□□ -0.67
RPAIN-204ENST00000405578 FBXL22Q6P050 247 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 RFWD3Q6PCD5 774 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 DAAM2Q86T65 1068 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 MAP7D3Q8IWC1 876 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 CAMKK1Q8N5S9 505 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 CCDC185Q8N715 623 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 KIAA1524Q8TCG1 905 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 UBE2Q2Q8WVN8 375 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 TEKT4Q8WW24 435 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 CD101Q93033 1021 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 BHMTQ93088 406 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 ALS2CR12Q96Q35 445 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 P2RY13Q9BPV8 354 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 LACRTQ9GZZ8 138 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 DHX35Q9H5Z1 703 aaKnown RBP10.86□□□□□ -0.67
RPAIN-204ENST00000405578 ZWILCHQ9H900 591 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 XPO7Q9UIA9 1087 aaKnown RBP10.86□□□□□ -0.67
RPAIN-204ENST00000405578 VANGL2Q9ULK5 521 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 FZD10Q9ULW2 581 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 INVSQ9Y283 1065 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 GON4LQ3T8J9 2241 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 MYH10P35580 1976 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 SHROOM3Q8TF72 1996 aa10.86□□□□□ -0.67
RPAIN-204ENST00000405578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 A0A1B0GVM2 712 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 RCCD1A6NED2 376 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 TCAF2A6NFQ2 919 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 E9PAM4 449 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 H0Y626 953 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 BUB1O43683 1085 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 CACNG3O60359 315 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 BUB1BO60566 1050 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 EGFP01133 1207 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 DRD1P21728 446 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 SLC6A4P31645 630 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 ARL4AP40617 200 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 GRIA2P42262 883 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 ZNF177Q13360 481 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 KRT81Q14533 505 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 TMEM196Q5HYL7 178 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 LRRC38Q5VT99 294 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 FYB2Q5VWT5 728 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 PMS2CLQ68D20 193 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 GRAMD4Q6IC98 578 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 ZNF662Q6ZS27 426 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 CHST9Q7L1S5 443 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 CYP2U1Q7Z449 544 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 POLNQ7Z5Q5 900 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 MFN1Q8IWA4 741 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 RHOT1Q8IXI2 618 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 CARNMT1Q8N4J0 409 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 NAT16Q8N8M0 369 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 KCTD6Q8NC69 237 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 TPCN2Q8NHX9 752 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 HSPH1Q92598 858 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 TBC1D31Q96DN5 1066 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 BBC3Q96PG8 261 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 PNKPQ96T60 521 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 PRMT1Q99873 361 aaKnown RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 ZYG11BQ9C0D3 744 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 SLC32A1Q9H598 525 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 CATSPERBQ9H7T0 1116 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 DNAJC17Q9NVM6 304 aaKnown RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 DDX56Q9NY93 547 aaKnown RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 PLK2Q9NYY3 685 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 PPARGC1AQ9UBK2 798 aaKnown RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 GUCA1BQ9UMX6 200 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 TFR2Q9UP52 801 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 PPP2R2CQ9Y2T4 447 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 ALG6Q9Y672 507 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 DUSP10Q9Y6W6 482 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 BPTFQ12830 3046 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 APC2O95996 2303 aa10.85□□□□□ -0.67
RPAIN-204ENST00000405578 SMG1Q96Q15 3661 aaKnown RBP10.85□□□□□ -0.67
RPAIN-204ENST00000405578 PLXND1Q9Y4D7 1925 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 TBC1D3BA6NDS4 549 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 GOLGA6L9A6NEM1 432 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 OTOL1A6NHN0 477 aaPredicted RBP10.84□□□□□ -0.67
RPAIN-204ENST00000405578 DRGXA6NNA5 263 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 H3BRJ5 948 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 EEF2KO00418 725 aaKnown RBP10.84□□□□□ -0.67
RPAIN-204ENST00000405578 GFRA2O00451 464 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 FGF10O15520 208 aaPredicted RBP10.84□□□□□ -0.67
RPAIN-204ENST00000405578 CREB3O43889 395 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 TULP3O75386 442 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 MOCS3O95396 460 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 APBB3O95704 486 aa10.84□□□□□ -0.67
RPAIN-204ENST00000405578 APODP05090 189 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms