RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PTPRN2Q92932 1015 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 LOXL4Q96JB6 756 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 PSMB7Q99436 277 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 ITM2CQ9NQX7 267 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 SEMA4GQ9NTN9 838 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 ABHD10Q9NUJ1 306 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 GPATCH2LQ9NWQ4 482 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 USP36Q9P275 1121 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 FZD10Q9ULW2 581 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 USP18Q9UMW8 372 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 GON4LQ3T8J9 2241 aa14.46□□□□□ -0.09
HLA-DQB1-202ENST00000399079 MFAP3LO75121 409 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 MT-CO1P00395 513 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ACADMP11310 421 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 GLDCP23378 1020 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NRG1Q02297 640 aaPredicted RBP14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 EFHC2Q5JST6 749 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 C6orf118Q5T5N4 469 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 C9orf64Q5T6V5 341 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 LPCAT2Q7L5N7 544 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 METTL3Q86U44 580 aaKnown RBP14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NLRP14Q86W24 1093 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 KDM1BQ8NB78 822 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ARHGEF26Q96DR7 871 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TRIM11Q96F44 468 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PPP1R9BQ96SB3 815 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CHP1Q99653 195 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 MRPL47Q9HD33 250 aaKnown RBP14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PCSK1NQ9UHG2 260 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 DNAI1Q9UI46 699 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 VPS51Q9UID3 782 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SCINQ9Y6U3 715 aa14.46□□□□□ -0.1
HLA-DQB1-202ENST00000399079 THADAQ6YHU6 1953 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 DOCK4Q8N1I0 1966 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 EDDM13A0A1B0GTR0 161 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 BCLAF3A2AJT9 711 aaKnown RBP14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CREB3O43889 395 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 MPLP40238 635 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NNMTP40261 264 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RPS14P62263 151 aaKnown RBP14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ARID5BQ14865 1188 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SF3A2Q15428 464 aaKnown RBP14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CA9Q16790 459 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ACCSLQ4AC99 568 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 LINGO4Q6UY18 593 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 FAM124AQ86V42 546 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 FNIP1Q8TF40 1166 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 FRS2Q8WU20 508 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TBC1D31Q96DN5 1066 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TOE1Q96GM8 510 aaKnown RBP14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 BTBD6Q96KE9 485 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PEBP4Q96S96 227 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SPON2Q9BUD6 331 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SLC25A13Q9UJS0 675 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NENFQ9UMX5 172 aa14.45□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ILVBLA1L0T0 632 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 K7ERQ8 282 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CBX4O00257 560 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 LRCH4O75427 683 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TPM1P09493 284 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TCF4P15884 667 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RHOQP17081 205 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 DESP17661 470 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 EPHB2P29323 1055 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CD6P30203 668 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 MIPP30301 263 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 L1CAMP32004 1257 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 GALCP54803 685 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 GNA12Q03113 381 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TBX2Q13207 712 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SEMA3BQ13214 749 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 DLG2Q15700 870 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ASTE1Q2TB18 679 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PLA2G2CQ5R387 149 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TCEAL6Q6IPX3 200 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CYP4V2Q6ZWL3 525 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 MMAAQ8IVH4 418 aaKnown RBP14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SLC41A1Q8IVJ1 513 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 STK40Q8N2I9 435 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SH2D3CQ8N5H7 860 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TCEAL3Q969E4 200 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 FAM129BQ96TA1 746 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 C2orf49Q9BVC5 232 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PACSIN1Q9BY11 444 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RSPH9Q9H1X1 276 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TMEM74BQ9NUR3 256 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TMEM248Q9NWD8 314 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZNHIT6Q9NWK9 470 aaKnown RBP14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 WSB2Q9NYS7 404 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PCDHGA5Q9Y5G8 931 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PLXND1Q9Y4D7 1925 aa14.44□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ATXN2Q99700 1313 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TARSL2A2RTX5 802 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PATE3B3GLJ2 98 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SMAD6O43541 496 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ATP9BO43861 1147 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 LRP3O75074 770 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NDUFS2O75306 463 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RNF8O76064 485 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms