RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 HNRNPLLQ8WVV9 542 aaKnown RBP11.46□□□□□ -0.57
SRMP1-201ENST00000398959 OR8D1Q8WZ84 308 aa11.46□□□□□ -0.57
SRMP1-201ENST00000398959 CNDP2Q96KP4 475 aaKnown RBP11.46□□□□□ -0.57
SRMP1-201ENST00000398959 PPP1R13BQ96KQ4 1090 aa11.46□□□□□ -0.57
SRMP1-201ENST00000398959 RPRD1AQ96P16 312 aaPredicted RBP11.46□□□□□ -0.57
SRMP1-201ENST00000398959 NOX5Q96PH1 765 aa11.46□□□□□ -0.57
SRMP1-201ENST00000398959 CPXM1Q96SM3 734 aa11.46□□□□□ -0.57
SRMP1-201ENST00000398959 PRMT1Q99873 361 aaKnown RBP11.46□□□□□ -0.57
SRMP1-201ENST00000398959 DKK4Q9UBT3 224 aa11.46□□□□□ -0.57
SRMP1-201ENST00000398959 CHD5Q8TDI0 1954 aa11.46□□□□□ -0.58
SRMP1-201ENST00000398959 BECN2A8MW95 431 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 TLR4O00206 839 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 PLK4O00444 970 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 WNT9AO14904 365 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 GADD45BO75293 160 aaPredicted RBP11.45□□□□□ -0.58
SRMP1-201ENST00000398959 LDOC1O95751 146 aaPredicted RBP11.45□□□□□ -0.58
SRMP1-201ENST00000398959 ZNF18P17022 549 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 SLC9A1P19634 815 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 DRD3P35462 400 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 HNF1BP35680 557 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 PLK1P53350 603 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 SNX16P57768 344 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 PPP2CBP62714 309 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 PPP2CAP67775 309 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 CENPCQ03188 943 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 NME3Q13232 169 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 MTA1Q13330 715 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 EIF4EBP2Q13542 120 aaPredicted RBP11.45□□□□□ -0.58
SRMP1-201ENST00000398959 FAM46CQ5VWP2 391 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 OR6B2Q6IFH4 312 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 CXorf57Q6NSI4 855 aaKnown RBP11.45□□□□□ -0.58
SRMP1-201ENST00000398959 FBXL22Q6P050 247 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 GBP6Q6ZN66 633 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 FAM183BPQ6ZVS7 135 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 PRPF39Q86UA1 669 aaKnown RBP11.45□□□□□ -0.58
SRMP1-201ENST00000398959 PDZD3Q86UT5 571 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 EID2Q8N6I1 236 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 SAP25Q8TEE9 199 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 SLC2A13Q96QE2 648 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 SYNCQ9H7C4 482 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 ASNSD1Q9NWL6 643 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 APEX2Q9UBZ4 518 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 VPS28Q9UK41 221 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 VANGL2Q9ULK5 521 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
SRMP1-201ENST00000398959 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.44□□□□□ -0.58
SRMP1-201ENST00000398959 A0A1W2PR77 199 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 C1QTNF3-AMACRE9PGA6 284 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 CBX4O00257 560 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 LATO43561 262 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 PLRG1O43660 514 aaKnown RBP11.44□□□□□ -0.58
SRMP1-201ENST00000398959 BNIP3LO60238 219 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 RTN2O75298 545 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 RFPL3O75679 317 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 EPHA8P29322 1005 aaPredicted RBP11.44□□□□□ -0.58
SRMP1-201ENST00000398959 MAT2AP31153 395 aaKnown RBP11.44□□□□□ -0.58
SRMP1-201ENST00000398959 KRT9P35527 623 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 METAP1P53582 386 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 APBA1Q02410 837 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 PTK2Q05397 1052 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 DNAJC3Q13217 504 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 ZNF177Q13360 481 aaPredicted RBP11.44□□□□□ -0.58
SRMP1-201ENST00000398959 CAMK2BQ13554 666 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 AUHQ13825 339 aaKnown RBP11.44□□□□□ -0.58
SRMP1-201ENST00000398959 SHBQ15464 509 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 EXOC3L4Q17RC7 722 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 POM121L1PQ3SYA9 428 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 NAPEPLDQ6IQ20 393 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 C11orf57Q6ZUT1 292 aaPredicted RBP11.44□□□□□ -0.58
SRMP1-201ENST00000398959 TMPRSS12Q86WS5 348 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 OXR1Q8N573 874 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 WDTC1Q8N5D0 677 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 MFSD2AQ8NA29 543 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 C1orf131Q8NDD1 294 aaKnown RBP11.44□□□□□ -0.58
SRMP1-201ENST00000398959 FRS2Q8WU20 508 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 SHC3Q92529 594 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 FEM1AQ9BSK4 669 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 SIK2Q9H0K1 926 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 MUC3BQ9H195 1237 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 KDM4CQ9H3R0 1056 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 SCUBE2Q9NQ36 999 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 RWDD2AQ9UIY3 292 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 SARDHQ9UL12 918 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 PCDHGC3Q9UN70 934 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 PCDHGA1Q9Y5H4 931 aa11.44□□□□□ -0.58
SRMP1-201ENST00000398959 IGSF10Q6WRI0 2623 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 C10orf142B7Z368 130 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 E9PAM4 449 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 M0QYT0 321 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 ALOX15BO15296 676 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 SLC7A4O43246 635 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 ATP9BO43861 1147 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 MAGEC1O60732 1142 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 PAGE1O75459 146 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 CLDN11O75508 207 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 DAB1O75553 588 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 ERBB2P04626 1255 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 C1SP09871 688 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 CDK4P11802 303 aa11.43□□□□□ -0.58
SRMP1-201ENST00000398959 JUPP14923 745 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms