RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 THAP1Q9NVV9 213 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 WBP1LQ9NX94 342 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 RNF11Q9Y3C5 154 aa10.36□□□□□ -0.75
HMGCLL1-205ENST00000398661 COL6A3P12111 3177 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 LOC100653049A0A140TA62 436 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ACKR2O00590 384 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 TOM1L1O75674 476 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 KRT34O76011 436 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 TMEM63AO94886 807 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 H6PDO95479 791 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZBTB11O95625 1053 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 NFICP08651 508 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 HOXD10P28358 340 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ELK3P41970 407 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 NSFP46459 744 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 C21orf59P57076 290 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 MRPS22P82650 360 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 SNX17Q15036 470 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZNF394Q53GI3 561 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 DCAF6Q58WW2 860 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 LIN9Q5TKA1 542 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 TDRD10Q5VZ19 366 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZFP1Q6P2D0 407 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 DCLRE1AQ6PJP8 1040 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 SCARA5Q6ZMJ2 495 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 SPOCD1Q6ZMY3 1216 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 TAB3Q8N5C8 712 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZFP42Q96MM3 310 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZNF778Q96MU6 729 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 NT5C1BQ96P26 610 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 MTG1Q9BT17 334 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 PRDM16Q9HAZ2 1276 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 GOLGA2P5Q9HBQ8 144 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 SNTG2Q9NY99 539 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 EBF1Q9UH73 591 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 GTF2IRD1Q9UHL9 959 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 XPO7Q9UIA9 1087 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 NOD1Q9Y239 953 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 DNAJC16Q9Y2G8 782 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 MBLAC1A4D2B0 266 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 KBTBD13C9JR72 458 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 GOLGA8TH3BQL2 631 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 B4GALT4O60513 344 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZMPSTE24O75844 475 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 BAIAP3O94812 1187 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 KRT19P08727 400 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 SNRPAP09012 282 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 S100A1P23297 94 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 NDST2P52849 883 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 PDPK2PQ6A1A2 396 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 OGFOD2Q6N063 350 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 MON1BQ7L1V2 547 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 GPR180Q86V85 440 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 SLC26A11Q86WA9 606 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 CLVS1Q8IUQ0 354 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 LILRA2Q8N149 483 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 PIWIL2Q8TC59 973 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ISOC1Q96CN7 298 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 SGF29Q96ES7 293 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 PKP2Q99959 881 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 DCUN1D5Q9BTE7 237 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 GCOM2Q9BZD3 368 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 VPS45Q9NRW7 570 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 PACSIN3Q9UKS6 424 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 ARHGAP26Q9UNA1 814 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 CDY2AQ9Y6F7 541 aa10.35□□□□□ -0.75
HMGCLL1-205ENST00000398661 MYO9BQ13459 2157 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 H3BNH8 94 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 PQBP1O60828 265 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 KRT37O76014 449 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 CAPNS1P04632 268 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 STAG3L1P0CL83 205 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 TCF4P15884 667 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 RPL22P35268 128 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 GDF10P55107 478 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 YWHAGP61981 247 aaKnown RBP eCLIP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 TUBA4AP68366 448 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 MAMLD1Q13495 774 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 ATP1A4Q13733 1029 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 DEPDC1Q5TB30 811 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 NANOGP8Q6NSW7 305 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 NEPROQ6NW34 567 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 RSPH3Q86UC2 560 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 KLHDC9Q8NEP7 349 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 SLC35B2Q8TB61 432 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 GRIN3AQ8TCU5 1115 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 CHPT1Q8WUD6 406 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 C12orf43Q96C57 262 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 CGREF1Q99674 301 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 CAAP1Q9H8G2 361 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 C10orf88Q9H8K7 445 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 MRPL47Q9HD33 250 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 MKS1Q9NXB0 559 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 STK39Q9UEW8 545 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 GIT1Q9Y2X7 761 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZNF236Q9UL36 1845 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 SCN10AQ9Y5Y9 1956 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 hCG_1818297A0A087WSY0 165 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 A0A1W2PQ45 241 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 A0A1W2PQY0 241 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms