RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 NSMCE2Q96MF7 247 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 FOPNLQ96NB1 174 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 TMEM79Q9BSE2 394 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 NXF3Q9H4D5 531 aaKnown RBP12.65□□□□□ -0.38
SOCS6-201ENST00000397942 WDR41Q9HAD4 459 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 SMPD4Q9NXE4 827 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 AP4S1Q9Y587 144 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 LYPLA1O75608 230 aaPredicted RBP12.65□□□□□ -0.38
SOCS6-201ENST00000397942 FAM155BO75949 473 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 DCAF12L1Q5VU92 463 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 UGT3A1Q6NUS8 523 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 ALYREFQ86V81 257 aaKnown RBP12.65□□□□□ -0.38
SOCS6-201ENST00000397942 PRDM5Q9NQX1 630 aaPredicted RBP12.65□□□□□ -0.38
SOCS6-201ENST00000397942 LGALS13Q9UHV8 139 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 KNTC1P50748 2209 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 CLOCKO15516 846 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 ATP6V1C1P21283 382 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 JAG1P78504 1218 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 PCID2Q5JVF3 399 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 SLC4A11Q8NBS3 891 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 PRDM16Q9HAZ2 1276 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 EXOSC4Q9NPD3 245 aaKnown RBP12.65□□□□□ -0.38
SOCS6-201ENST00000397942 TAS2R1Q9NYW7 299 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 SH3BP1Q9Y3L3 701 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 ADGRA3Q8IWK6 1321 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 SYNCRIPO60506 623 aaKnown RBP12.65□□□□□ -0.38
SOCS6-201ENST00000397942 SERPINB10P48595 397 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 STRADAQ7RTN6 431 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 DHFR2Q86XF0 187 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 GSTCDQ8NEC7 633 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 ADAM2Q99965 735 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 PIDD1Q9HB75 910 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 NMRK2Q9NPI5 230 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 XPR1Q9UBH6 696 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 SPASTQ9UBP0 616 aa12.65□□□□□ -0.38
SOCS6-201ENST00000397942 CLDN5O00501 218 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 DEAF1O75398 565 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 ALDH2P05091 517 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 RHOCP08134 193 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 CCNB1P14635 433 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 ATP5F1P24539 256 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 WASHC5Q12768 1159 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 PRAMEF19Q5SWL8 479 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 DRICH1Q6PGQ1 229 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 XYLT1Q86Y38 959 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 RBM15BQ8NDT2 890 aaKnown RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 SNRNP27Q8WVK2 155 aaKnown RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 SPATA17Q96L03 361 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 ZNF229Q9UJW7 825 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 PCDHGC3Q9UN70 934 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 APOA1P02647 267 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 GRM5P41594 1212 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 MSLNQ13421 630 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 VSTM1Q6UX27 236 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 DNAJC14Q6Y2X3 702 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 ULK2Q8IYT8 1036 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 SLC35B2Q8TB61 432 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 GOLGA2P5Q9HBQ8 144 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 CHKBQ9Y259 395 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 EIF3LQ9Y262 564 aaKnown RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 RAD54BQ9Y620 910 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 ZMYM2Q9UBW7 1377 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 A8MUI8 341 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 ITGALP20701 1170 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 POLD3Q15054 466 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 ZNF516Q92618 1163 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 C18orf25Q96B23 403 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 ATP13A1Q9HD20 1204 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 CNGB3Q9NQW8 809 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 SNX15Q9NRS6 342 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 MARCH2Q9P0N8 246 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 SNED1Q8TER0 1413 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 SMIM28A0A1B0GU29 152 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 RGSL1A5PLK6 1076 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 C5orf60A6NFR6 353 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 PAPSS1O43252 624 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 TMEM63AO94886 807 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 SERPINA6P08185 405 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 CYP2C18P33260 490 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 CDH13P55290 713 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 RHOAP61586 193 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 CACHD1Q5VU97 1274 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 TXNRD3NBQ6F5E7 133 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 SLC26A9Q7LBE3 791 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 GPR141Q7Z602 305 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 KCTD4Q8WVF5 259 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 IL1RAPL1Q9NZN1 696 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 PCDHB5Q9Y5E4 795 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 COL1A1P02452 1464 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 RASSF9O75901 435 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 HOXB8P17481 243 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 TFEBP19484 476 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 MSX2P35548 267 aaPredicted RBP12.64□□□□□ -0.39
SOCS6-201ENST00000397942 RAD23AP54725 363 aa12.64□□□□□ -0.39
SOCS6-201ENST00000397942 NRLP54845 237 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms