RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 VSIG10LQ86VR7 867 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 OSCP1Q8WVF1 389 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 CPNE1Q99829 537 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 PHACTR1Q9C0D0 580 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 PABPC3Q9H361 631 aaKnown RBP11.54□□□□□ -0.56
TTC28-201ENST00000397906 CDH9Q9ULB4 789 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 TMEM131LA2VDJ0 1609 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 M0R3G1 203 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 PSMB4P28070 264 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 HTR1BP28222 390 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 MAGEC3Q8TD91 643 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 ACO2Q99798 780 aaKnown RBP11.54□□□□□ -0.56
TTC28-201ENST00000397906 ATP13A3Q9H7F0 1226 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 OPTCQ9UBM4 332 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 CCDC154A6NI56 674 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 FGBP02675 491 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 CNPP09543 421 aaKnown RBP11.54□□□□□ -0.56
TTC28-201ENST00000397906 CAPSQ13938 189 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 SPANXN3Q5MJ09 141 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 GPR158Q5T848 1215 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 WDR59Q6PJI9 974 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 WNT8BQ93098 351 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 BTBD9Q96Q07 612 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 FAM105AQ9NUU6 356 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 VTI1BQ9UEU0 232 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 KLHL3Q9UH77 587 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 KRT33AO76009 404 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 CSNK2BP67870 215 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 GCNT1Q02742 428 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 MPP6Q9NZW5 540 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 SOX13Q9UN79 622 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 ACSL4O60488 711 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 DNTTP04053 509 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 ASGR1P07306 291 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 ADRB2P07550 413 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 HPCAL1P37235 193 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 GRIK3Q13003 919 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 SYT12Q8IV01 421 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 LZTR1Q8N653 840 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 ADH1CP00326 375 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 CHKAP35790 457 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 CYP2A13Q16696 494 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 GPSM1Q86YR5 675 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 HGH1Q9BTY7 390 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 CDT1Q9H211 546 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 SLC24A3Q9HC58 644 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 GULP1Q9UBP9 304 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 MAFO75444 373 aaPredicted RBP11.54□□□□□ -0.56
TTC28-201ENST00000397906 CNTFP26441 200 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 NOS2P35228 1153 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 EVX2Q03828 476 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 ICE2Q659A1 982 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 PPP2R2DQ66LE6 453 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 FAAH2Q6GMR7 532 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 FAM9CQ8IZT9 166 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 METTL6Q8TCB7 284 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 RERGQ96A58 199 aaPredicted RBP11.54□□□□□ -0.56
TTC28-201ENST00000397906 NAT9Q9BTE0 207 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 SLC4A5Q9BY07 1137 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 VIPAS39Q9H9C1 493 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 A0A087X0B3 334 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 GLTPD2A6NH11 291 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 OR10H2O60403 315 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 OR4Q2P0C623 313 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 MCL1Q07820 350 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 KCNMA1Q12791 1236 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 UGCGQ16739 394 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 CRTC3Q6UUV7 619 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 TRHDEQ9UKU6 1024 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 ARHGAP23Q9P227 1491 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 A0A088AWK7 358 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 LRRC14BA6NHZ5 514 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 CSH1P0DML2 217 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 CSH2P0DML3 217 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 ZNF10P21506 573 aaPredicted RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 IRX1P78414 480 aaPredicted RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 ZCCHC23Q6ZST2 131 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 NLRP9Q7RTR0 991 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 ELOA2Q8IYF1 753 aaPredicted RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 POLG2Q9UHN1 485 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 MCM8Q9UJA3 840 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 CNTNAP1P78357 1384 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 IFNA14P01570 189 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 RHBDL3P58872 404 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 SKP1P63208 163 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 PAPOLBQ9NRJ5 636 aaKnown RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 PPM1AP35813 382 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 ABRQ12979 859 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 MTDHQ86UE4 582 aaKnown RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 LRRC34Q8IZ02 419 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 GLIS3Q8NEA6 775 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 NMRAL1Q9HBL8 299 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 GPN3Q9UHW5 284 aaPredicted RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 KIAA1210Q9ULL0 1709 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 MACC1Q6ZN28 852 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 C3orf20Q8ND61 904 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 CFAP97Q9P2B7 532 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 DEAF1O75398 565 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms