RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MMAAQ8IVH4 418 aaKnown RBP9.06□□□□□ -0.96
CAPN3-208ENST00000397204 DHX40Q8IX18 779 aaKnown RBP9.06□□□□□ -0.96
CAPN3-208ENST00000397204 OXR1Q8N573 874 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 LSM14AQ8ND56 463 aaKnown RBP9.06□□□□□ -0.96
CAPN3-208ENST00000397204 TFAP2BQ92481 460 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 SLC39A13Q96H72 371 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 CNDP2Q96KP4 475 aaKnown RBP9.06□□□□□ -0.96
CAPN3-208ENST00000397204 SLC6A18Q96N87 628 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 SERPINB11Q96P15 392 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 UBL7Q96S82 380 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-208ENST00000397204 TSG101Q99816 390 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 GTPBP4Q9BZE4 634 aaKnown RBP9.06□□□□□ -0.96
CAPN3-208ENST00000397204 NRSN2Q9GZP1 204 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 SCAND2PQ9GZW5 306 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-208ENST00000397204 EBF2Q9HAK2 575 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 AASDHPPTQ9NRN7 309 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 RMND1Q9NWS8 449 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 SERGEFQ9UGK8 458 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 ARMCX3Q9UH62 379 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-208ENST00000397204 ERVW-1Q9UQF0 538 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 TLR6Q9Y2C9 796 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 PTPRBP23467 1997 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 A0A1W2PP55 124 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 TTC34A8MYJ7 566 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 PLK4O00444 970 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 MID1O15344 667 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 RRP8O43159 456 aaKnown RBP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 SART1O43290 800 aaKnown RBP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 LATO43561 262 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 MAGEC1O60732 1142 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 FYNP06241 537 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 NNMTP40261 264 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 EIF2S3P41091 472 aaKnown RBP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 PRCPP42785 496 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 RPL34P49207 117 aaKnown RBP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 RGS7P49802 495 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 NXPH1P58417 271 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 RPS24P62847 133 aaKnown RBP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 IL9RQ01113 521 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 C19orf57Q0VDD7 668 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 OVGP1Q12889 678 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 LRMPQ12912 555 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 TARDBPQ13148 414 aaKnown RBP eCLIP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 SLC12A1Q13621 1099 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 CDH18Q13634 790 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 RTP5Q14D33 572 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 SHBQ15464 509 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 DCAF6Q58WW2 860 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 DCAF17Q5H9S7 520 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 FSCBQ5H9T9 825 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 PITRM1Q5JRX3 1037 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 RNF219Q5W0B1 726 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 ANKRD40Q6AI12 368 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 TMEM270Q6UE05 265 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 LRRC69Q6ZNQ3 347 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 IQCHQ86VS3 1027 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 CARNMT1Q8N4J0 409 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 EID2Q8N6I1 236 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 MFSD2AQ8NA29 543 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 OR14C36Q8NHC7 312 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 SLC35C1Q96A29 364 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 NXPE2Q96DL1 559 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 SERAC1Q96JX3 654 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 FCRL2Q96LA5 508 aaPredicted RBP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 NT5C1BQ96P26 610 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 GSDMAQ96QA5 445 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 PPP1R9BQ96SB3 815 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 TRIM62Q9BVG3 475 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 METTL14Q9HCE5 456 aaKnown RBP9.05□□□□□ -0.96
CAPN3-208ENST00000397204 SLCO3A1Q9UIG8 710 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 PCDHB4Q9Y5E5 795 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 ATP6V1DQ9Y5K8 247 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 AK5Q9Y6K8 562 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 ITIH6Q6UXX5 1313 aa9.05□□□□□ -0.96
CAPN3-208ENST00000397204 TBC1D3DA0A087WVF3 549 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 TBC1D3IA0A087WXS9 549 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 TBC1D3EA0A087X179 549 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 TBC1D3KA0A087X1G2 549 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 TBC1D3FA6NER0 549 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-208ENST00000397204 TBC1D3LB9A6J9 549 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 RNF225M0QZC1 329 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-208ENST00000397204 WNT9AO14904 365 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 LUC7L3O95232 432 aaKnown RBP9.04□□□□□ -0.96
CAPN3-208ENST00000397204 TBC1D3HP0C7X1 549 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 CKMT2P17540 419 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 EPHA8P29322 1005 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-208ENST00000397204 ACADSBP45954 432 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 ACADVLP49748 655 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 OXCT1P55809 520 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 NUCB2P80303 420 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 SEMG2Q02383 582 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 LRRC63Q05C16 580 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 SULT2A1Q06520 285 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 CETN1Q12798 172 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 BNIP3Q12983 259 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 DNAJC3Q13217 504 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 ZNF658Q5TYW1 1059 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-208ENST00000397204 TBC1D3GQ6DHY5 549 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 TBC1D3CQ6IPX1 549 aa9.04□□□□□ -0.96
CAPN3-208ENST00000397204 NAPEPLDQ6IQ20 393 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms