RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 BBS12Q6ZW61 710 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 KBTBD6Q86V97 674 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 MMGT1Q8N4V1 131 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 NOA1Q8NC60 698 aaKnown RBP13.63□□□□□ -0.23
SEC13-209ENST00000397117 TSC1Q92574 1164 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 MAGOHBQ96A72 148 aaKnown RBP13.63□□□□□ -0.23
SEC13-209ENST00000397117 BTN2A3PQ96KV6 586 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 FAM83CQ9BQN1 747 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 SLC46A2Q9BY10 475 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 MAGEB5Q9BZ81 275 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 OSBPL2Q9H1P3 480 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 GKN1Q9NS71 199 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 CWC15Q9P013 229 aaKnown RBP13.63□□□□□ -0.23
SEC13-209ENST00000397117 STIM2Q9P246 746 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 OBSL1O75147 1896 aa13.63□□□□□ -0.23
SEC13-209ENST00000397117 TRAV19A0A0A6YYK7 116 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 APOL1O14791 398 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 PHF2O75151 1096 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 RPP40O75818 363 aaKnown RBP13.62□□□□□ -0.23
SEC13-209ENST00000397117 HDCP19113 662 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 CHRNA3P32297 505 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 PXNP49023 591 aaPredicted RBP13.62□□□□□ -0.23
SEC13-209ENST00000397117 CYP4F8P98187 520 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 ADCY2Q08462 1091 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 ACBD5Q5T8D3 534 aaPredicted RBP13.62□□□□□ -0.23
SEC13-209ENST00000397117 STPG1Q5TH74 334 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 FSTL4Q6MZW2 842 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 RFX8Q6ZV50 586 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 PRELID2Q8N945 189 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 C12orf50Q8NA57 414 aaPredicted RBP13.62□□□□□ -0.23
SEC13-209ENST00000397117 TTC13Q8NBP0 860 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 PCDH19Q8TAB3 1148 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 C1orf54Q8WWF1 131 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 PLD4Q96BZ4 506 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 FAF2Q96CS3 445 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 CHFRQ96EP1 664 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 ZC3H10Q96K80 434 aaKnown RBP13.62□□□□□ -0.23
SEC13-209ENST00000397117 RNF38Q9H0F5 515 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 DDX47Q9H0S4 455 aaKnown RBP13.62□□□□□ -0.23
SEC13-209ENST00000397117 PRDM16Q9HAZ2 1276 aa13.62□□□□□ -0.23
SEC13-209ENST00000397117 THG1LQ9NWX6 298 aaKnown RBP13.62□□□□□ -0.23
SEC13-209ENST00000397117 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.62□□□□□ -0.23
SEC13-209ENST00000397117 V9GYY5 206 aaPredicted RBP13.62□□□□□ -0.23
SEC13-209ENST00000397117 ZFHX4Q86UP3 3567 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 FAM208BQ5VWN6 2430 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 FAM72CH0Y354 149 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 I6L893 689 aaPredicted RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 TRDMT1O14717 391 aaKnown RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 IGLV3-27P01718 113 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 CKMP06732 381 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 PFKLP17858 780 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 KCNA4P22459 653 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 DDX6P26196 483 aaKnown RBP eCLIP13.61□□□□□ -0.233e-6■□□□□ 8.8
SEC13-209ENST00000397117 HCAR3P49019 387 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 SIX1Q15475 284 aaPredicted RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 FAM72AQ5TYM5 149 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 FAM72DQ6L9T8 149 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 C8orf74Q6P047 294 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 FAM72BQ86X60 149 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 ARL14EPQ8N8R7 260 aaPredicted RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 MAB21L3Q8N8X9 362 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 CCDC26Q8TAB7 109 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 HAUS1Q96CS2 278 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 C1orf74Q96LT6 269 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 RUNDC3BQ96NL0 473 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 CYP2S1Q96SQ9 504 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 FRMD8P1Q9BZ68 369 aaPredicted RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 SMG9Q9H0W8 520 aaKnown RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 HPS4Q9NQG7 708 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 PCDHGA5Q9Y5G8 931 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 OTOL1A6NHN0 477 aaPredicted RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 APOC4-APOC2K7ER74 178 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 DYNC1I1O14576 645 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 ATG13O75143 517 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 APOC2P02655 101 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 IRF1P10914 325 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 TGM2P21980 687 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 EPHB2P29323 1055 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 HTR7P34969 479 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 SLC11A2P49281 568 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 SEMA3BQ13214 749 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 SNX1Q13596 522 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 CCNG2Q16589 344 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 CYP1B1Q16678 543 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 GLE1Q53GS7 698 aaKnown RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 SLC9A4Q6AI14 798 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 RWDD4Q6NW29 188 aaKnown RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 LRRC31Q6UY01 552 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 MAATS1Q7Z4T9 603 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 CMTM8Q8IZV2 173 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 ABCA7Q8IZY2 2146 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 PQLC3Q8N755 202 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 ATG4AQ8WYN0 398 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 NUP205Q92621 2012 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 P3H4Q92791 437 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 KLF16Q9BXK1 252 aaPredicted RBP13.61□□□□□ -0.23
SEC13-209ENST00000397117 DCLK3Q9C098 648 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 LRRC19Q9H756 370 aa13.61□□□□□ -0.23
SEC13-209ENST00000397117 ARHGEF4Q9NR80 690 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms