RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 SLC17A6Q9P2U8 582 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 PLLPQ9Y342 182 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 DNAH12Q6ZR08 3092 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 DOCK4Q8N1I0 1966 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 MICAL3Q7RTP6 2002 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 FAM92AA1XBS5 289 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 HMX2A2RU54 273 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 MTMR11A4FU01 709 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 USP1O94782 785 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 NEFHP12036 1026 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 CCNB1P14635 433 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 NPY2RP49146 381 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 CDHR3Q6ZTQ4 885 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 LINC00523Q86TU6 105 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 KLHDC8BQ8IXV7 354 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
CBX3-202ENST00000396386 ACMSDQ8TDX5 336 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 C1orf74Q96LT6 269 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 PPP1R2P1Q96PQ5 205 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 IL12RB2Q99665 862 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 SLC39A8Q9C0K1 460 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 TXNDC16Q9P2K2 825 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 HCSTQ9UBK5 93 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 GGT7Q9UJ14 662 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 MYLKQ15746 1914 aa15.27■□□□□ 0.04
CBX3-202ENST00000396386 WASH4PA8MWX3 477 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 MATN3O15232 486 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 CACNG3O60359 315 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 MAFKO60675 156 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 DNAJB2P25686 324 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 PSEN1P49768 467 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 SMARCB1Q12824 385 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 CDH17Q12864 832 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 TCTN1Q2MV58 587 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 GALNTL6Q49A17 601 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 ARTNQ5T4W7 220 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 PIK3R6Q5UE93 754 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 AFMIDQ63HM1 303 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 C14orf80Q86SX3 495 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 TRIM42Q8IWZ5 723 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 NDUFAF2Q8N183 169 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 LRRC43Q8N309 656 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 CNTD1Q8N815 330 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 ATP6V0D2Q8N8Y2 350 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 ZNF398Q8TD17 642 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 C10orf82Q8WW14 230 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 THOC1Q96FV9 657 aaKnown RBP15.27■□□□□ 0.03
CBX3-202ENST00000396386 SEPT5Q99719 369 aaPredicted RBP15.27■□□□□ 0.03
CBX3-202ENST00000396386 TSSK1BQ9BXA7 367 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 OXCT2Q9BYC2 517 aaPredicted RBP15.27■□□□□ 0.03
CBX3-202ENST00000396386 IL22Q9GZX6 179 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 ALG13Q9NP73 1137 aaKnown RBP15.27■□□□□ 0.03
CBX3-202ENST00000396386 TLR8Q9NR97 1041 aaKnown RBP15.27■□□□□ 0.03
CBX3-202ENST00000396386 WBP1LQ9NX94 342 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 CLIC5Q9NZA1 410 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 AAR2Q9Y312 384 aaKnown RBP15.27■□□□□ 0.03
CBX3-202ENST00000396386 TRIM17Q9Y577 477 aa15.27■□□□□ 0.03
CBX3-202ENST00000396386 FAM237BA0A1B0GVD1 139 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 TBKBP1A7MCY6 615 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 PQBP1O60828 265 aaKnown RBP15.26■□□□□ 0.03
CBX3-202ENST00000396386 DCTN3O75935 186 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 ANXA9O76027 345 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 BGNP21810 368 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 ALDH3A1P30838 453 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 CRHR1P34998 444 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 GP5P40197 560 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 CENPFP49454 3210 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 MLLT6P55198 1093 aaPredicted RBP15.26■□□□□ 0.03
CBX3-202ENST00000396386 EFEMP1Q12805 493 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 GPR17Q13304 367 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 TRIP4Q15650 581 aaPredicted RBP15.26■□□□□ 0.03
CBX3-202ENST00000396386 MGAT5BQ3V5L5 792 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 CES3Q6UWW8 571 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 TMEM135Q86UB9 458 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 LRRC49Q8IUZ0 686 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 TET1Q8NFU7 2136 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 GPR152Q8TDT2 470 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 C2orf15Q8WU43 125 aaKnown RBP15.26■□□□□ 0.03
CBX3-202ENST00000396386 PTPRN2Q92932 1015 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 SPATA17Q96L03 361 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 FCRL5Q96RD9 977 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 CPNE1Q99829 537 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 APOL2Q9BQE5 337 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 SLC13A1Q9BZW2 595 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 GLOD4Q9HC38 313 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 COMMD8Q9NX08 183 aa15.26■□□□□ 0.03
CBX3-202ENST00000396386 MAGEB16A2A368 324 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 KLF11O14901 512 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 SOAT2O75908 522 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 IL1BP01584 269 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 ITGA2BP08514 1039 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 ERVK-10P10266 1014 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 HAPLN1P10915 354 aaPredicted RBP15.25■□□□□ 0.03
CBX3-202ENST00000396386 SETDB1Q15047 1291 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 ANO4Q32M45 955 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 ANKRD20A4Q4UJ75 823 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 RTP2Q5QGT7 225 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 ANKS3Q6ZW76 656 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 OTOP3Q7RTS5 596 aa15.25■□□□□ 0.03
CBX3-202ENST00000396386 FITM2Q8N6M3 262 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms