RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PCGF5Q86SE9 256 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 ZNF354CQ86Y25 554 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 HMCESQ96FZ2 354 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 SPATA13Q96N96 652 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 FMO2Q99518 471 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 MTRF1LQ9UGC7 380 aaKnown RBP20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 MTCH2Q9Y6C9 303 aa20.91■□□□□ 0.94
VCPKMT-202ENST00000395860 MAFKO60675 156 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 TCF3P15923 654 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 BASP1P80723 227 aaKnown RBP20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 USP4Q13107 963 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 ZNF77Q15935 545 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 EMBQ6PCB8 327 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 EP400NLQ6ZTU2 488 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 CEP41Q9BYV8 373 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 ADAM7Q9H2U9 754 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 CDH22Q9UJ99 828 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 GFRA2O00451 464 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 RHOCP08134 193 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 FAM153BP0C7A2 387 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 PTPN3P26045 913 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 WASHC5Q12768 1159 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 FAM153CQ494X1 144 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 MPPE1Q53F39 396 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 BEND6Q5SZJ8 279 aaPredicted RBP20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 CES5AQ6NT32 575 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 NPAS3Q8IXF0 933 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 CELF5Q8N6W0 485 aaKnown RBP20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 RIN3Q8TB24 985 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 DDI1Q8WTU0 396 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 GDAP1L1Q96MZ0 367 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 KIF9Q9HAQ2 790 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 CLDND1Q9NY35 253 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 FAM153AQ9UHL3 310 aa20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 IPO11Q9UI26 975 aaKnown RBP20.9■□□□□ 0.94
VCPKMT-202ENST00000395860 MYO18AQ92614 2054 aaKnown RBP20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 H0Y626 953 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 OPHN1O60890 802 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 WEE1P30291 646 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 TNNT3P45378 269 aaPredicted RBP20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 GNA12Q03113 381 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 ATAT1Q5SQI0 421 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 RNASEH2BQ5TBB1 312 aaKnown RBP20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 HIBCHQ6NVY1 386 aaPredicted RBP20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 TPGS1Q6ZTW0 290 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 SETD3Q86TU7 594 aaPredicted RBP20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 ZNF567Q8N184 647 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 CARNMT1Q8N4J0 409 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 FGF13Q92913 245 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 VAT1Q99536 393 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 MAGEH1Q9H213 219 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 SP110Q9HB58 689 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 RAB6BQ9NRW1 208 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 CLEC1BQ9P126 229 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 KLHL8Q9P2G9 620 aaPredicted RBP20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 TBC1D14Q9P2M4 693 aa20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 PRRC2BQ5JSZ5 2229 aaKnown RBP20.89■□□□□ 0.93
VCPKMT-202ENST00000395860 MATN3O15232 486 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 TP73O15350 636 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 LUC7L3O95232 432 aaKnown RBP20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 CYBBP04839 570 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 IGFBP4P22692 258 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 MORF4L2Q15014 288 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 PID1Q7Z2X4 250 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 PPIL6Q8IXY8 311 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 CPT1BQ92523 772 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 ARHGEF2Q92974 986 aaKnown RBP20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 BHMTQ93088 406 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 CAVIN3Q969G5 261 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 TBC1D30Q9Y2I9 924 aa20.88■□□□□ 0.93
VCPKMT-202ENST00000395860 ILVBLA1L0T0 632 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 TBX10O75333 385 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 CCNB1P14635 433 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 ACVRL1P37023 503 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 ZBTB17Q13105 803 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 SERINC3Q13530 473 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 ANO4Q32M45 955 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 TEX44Q53QW1 395 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 RHBDF2Q6PJF5 856 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 FARP1Q9Y4F1 1045 aaPredicted RBP20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 A0A0D9SEW6 157 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 METTL18O95568 372 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 JCHAINP01591 159 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 DLX2Q07687 328 aaPredicted RBP20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 CDH18Q13634 790 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 ADGRE1Q14246 886 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 CTC1Q2NKJ3 1217 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 MPP7Q5T2T1 576 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 FAXCQ5TGI0 409 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 IL31Q6EBC2 164 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 OR52K2Q8NGK3 314 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 USP33Q8TEY7 942 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 ETNK1Q9HBU6 452 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 GDE1Q9NZC3 331 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 TRHDEQ9UKU6 1024 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 SHOC2Q9UQ13 582 aa20.87■□□□□ 0.93
VCPKMT-202ENST00000395860 J3KR12 359 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 NEBLO76041 1014 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 POU3F3P20264 500 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms