RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CDH9Q9ULB4 789 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 FAM20BO75063 409 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 CYP1A1P04798 512 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-203ENST00000394872 SERPINE1P05121 402 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 CYP3A4P08684 503 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 NPR3P17342 541 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 ZC3H12AQ5D1E8 599 aaKnown RBP10.56□□□□□ -0.72
COL4A6-203ENST00000394872 RGMBQ6NW40 437 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 SYT12Q8IV01 421 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 WNT8BQ93098 351 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 VAT1Q99536 393 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 PAIP2BQ9ULR5 123 aaKnown RBP10.56□□□□□ -0.72
COL4A6-203ENST00000394872 CCDC85CA6NKD9 419 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 RIPK2O43353 540 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 VPS4BO75351 444 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 CD86P42081 329 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 GPR1P46091 355 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 PFKPQ01813 784 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 WDR93Q6P2C0 686 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 CASP12Q6UXS9 341 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 LACRTQ9GZZ8 138 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 CXorf56Q9H5V9 222 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 OR12D3Q9UGF7 316 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 HES2Q9Y543 173 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 CHURC1-FNTBB4DL54 471 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 TLL1O43897 1013 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 GUCY1B2O75343 617 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 PIK3CGP48736 1102 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 KPNB1Q14974 876 aaKnown RBP10.56□□□□□ -0.72
COL4A6-203ENST00000394872 DDR2Q16832 855 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 USP41Q3LFD5 358 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 MYCBPAPQ8TBZ2 947 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 C18orf25Q96B23 403 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-203ENST00000394872 EXO5Q9H790 373 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 DNPEPQ9ULA0 475 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 N6AMT1Q9Y5N5 214 aa10.56□□□□□ -0.72
COL4A6-203ENST00000394872 VWDEQ8N2E2 1590 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 BCL9O00512 1426 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 FAM25AB3EWG3 89 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 FAM25CB3EWG5 89 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 FAM25GB3EWG6 89 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 TRDMT1O14717 391 aaKnown RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 HS6ST1O60243 411 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 RBL1P28749 1068 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 NDUFV1P49821 464 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 RAD23AP54725 363 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 IL27RAQ6UWB1 636 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 SERPINA13PQ6UXR4 307 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 EID3Q8N140 333 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 WDR36Q8NI36 951 aaKnown RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ADPRHL2Q9NX46 363 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 PPIEQ9UNP9 301 aaKnown RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 USP12O75317 370 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ADH1AP07327 375 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 CSNK2BP67870 215 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 SLC30A9Q6PML9 568 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ZBTB49Q6ZSB9 765 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 BNIPLQ7Z465 357 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 UNC93AQ86WB7 457 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 DEFB107AQ8IZN7 70 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 CYP4X1Q8N118 509 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 MYLPFQ96A32 169 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 MLPHQ9BV36 600 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 RSPH9Q9H1X1 276 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 EPS8L2Q9H6S3 715 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 RPRD1BQ9NQG5 326 aaKnown RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 PDP2Q9P2J9 529 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 GNPTGQ9UJJ9 305 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 FAM50BQ9Y247 325 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 SLC27A5Q9Y2P5 690 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 SAC3D1A6NKF1 404 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ENO4A6NNW6 628 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 TISP43B9A030 160 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 OR6A2O95222 327 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 IFNA16P05015 189 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 GLRA2P23416 452 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 NTSP30990 170 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 PARP6Q2NL67 630 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ZNF621Q6ZSS3 439 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 FAM183BPQ6ZVS7 135 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 KYQ8NBH2 561 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 CXorf40BQ96DE9 158 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 NSMCE2Q96MF7 247 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 AASDHPPTQ9NRN7 309 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ATP6V1HQ9UI12 483 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 CROTQ9UKG9 612 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 MAP2P11137 1827 aaKnown RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ZBTB22O15209 634 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ATG7O95352 703 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 SSTR1P30872 391 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 PLK1P53350 603 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 IL2P60568 153 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 RBM23Q86U06 439 aaKnown RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 STARD8Q92502 1023 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 APOPT1Q96IL0 206 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 HTATIP2Q9BUP3 242 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 H3BMM5 538 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 TRIM13O60858 407 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 GNRH1P01148 92 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms