RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 PHGDHO43175 533 aaKnown RBP10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 E2F6O75461 281 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 PIRTP0C851 137 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 ITGB6P18564 788 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 RPL17P18621 184 aaKnown RBP10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 WARSP23381 471 aaKnown RBP10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 GABRR2P28476 465 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 ATXN1P54253 815 aaKnown RBP10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 NPAS4Q8IUM7 802 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 PIP4K2CQ8TBX8 421 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 APBB2Q92870 758 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 APOPT1Q96IL0 206 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 KLHL5Q96PQ7 755 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 SIX4Q9UIU6 781 aa10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 MRPS23Q9Y3D9 190 aaKnown RBP10.85□□□□□ -0.67
MTHFD2-201ENST00000394053 TMEM247A6NEH6 219 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 ALOX15BO15296 676 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 PRPF4O43172 522 aaKnown RBP eCLIP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 NUDT17P0C025 328 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 ATXN3P54252 364 aaPredicted RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 AIF1P55008 147 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 DAOAP59103 153 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 ABCE1P61221 599 aaKnown RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 SMARCB1Q12824 385 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 DNAL1Q4LDG9 190 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 PCID2Q5JVF3 399 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 ARMC12Q5T9G4 340 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 LRRC49Q8IUZ0 686 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 ZC3H3Q8IXZ2 948 aaKnown RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 CCDC185Q8N715 623 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 CERS2Q96G23 380 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TMEM161AQ9NX61 479 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TRAV19A0A0A6YYK7 116 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 ARVCFO00192 962 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TULP2O00295 520 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 KPNA3O00505 521 aaPredicted RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 PARNO95453 639 aaKnown RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 IGSF6O95976 241 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 MT-CO1P00395 513 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 SOX11P35716 441 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 DDX39BQ13838 428 aaKnown RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 C16orf46Q6P387 395 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 CACUL1Q86Y37 369 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 N4BP2L2Q92802 583 aaPredicted RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 HAUS8Q9BT25 410 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 SLC13A4Q9UKG4 626 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 SLX4Q8IY92 1834 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TRPC5OSA6NMA1 111 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 LRIG2O94898 1065 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TCN1P20061 433 aaPredicted RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TKTP29401 623 aaKnown RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 PEX5P50542 639 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 MTDHQ86UE4 582 aaKnown RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 MYO1HQ8N1T3 1032 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 SCAMP5Q8TAC9 235 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 PLK2Q9NYY3 685 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 SLC4A7Q9Y6M7 1214 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TOGARAM1Q9Y4F4 1720 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TRIM13O60858 407 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TBL1XO60907 577 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 RNASEH1O60930 286 aaKnown RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 DDHD2O94830 711 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 RPA3P35244 121 aaPredicted RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 PLK1P53350 603 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 SEL1L3Q68CR1 1132 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 ZCCHC23Q6ZST2 131 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 RBM23Q86U06 439 aaKnown RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 PCYOX1LQ8NBM8 494 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 RFWD2Q8NHY2 731 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 LMO3Q8TAP4 145 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 TRIB2Q92519 343 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 MCRS1Q96EZ8 462 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 BTN2A3PQ96KV6 586 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 KCTD15Q96SI1 283 aaPredicted RBP10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 ARHGAP39Q9C0H5 1083 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 ACSS3Q9H6R3 686 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 RIC8BQ9NVN3 520 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 HAO1Q9UJM8 370 aa10.84□□□□□ -0.67
MTHFD2-201ENST00000394053 MFSD11O43934 449 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 LAG3P18627 525 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 GJA5P36382 358 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 CRYBG2Q8N1P7 616 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 MAB21L3Q8N8X9 362 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 IL1RL2Q9HB29 575 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 ARHGEF4Q9NR80 690 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 TAS2R13Q9NYV9 303 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.83□□□□□ -0.681e-8■■■■■ 31.9
MTHFD2-201ENST00000394053 RCOR3Q9P2K3 495 aaPredicted RBP10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 NAV1Q8NEY1 1877 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 TCRBV9S1A1TA0A576 114 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 SYN3O14994 580 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 CLASP2O75122 1294 aaKnown RBP10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 MPOP05164 745 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 GJA9P57773 515 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 B3GNT9Q6UX72 402 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 OTOAQ7RTW8 1153 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 B3GALT6Q96L58 329 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 NEUROG2Q9H2A3 272 aa10.83□□□□□ -0.68
MTHFD2-201ENST00000394053 LRRC4CQ9HCJ2 640 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms