RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 RNF219Q5W0B1 726 aaPredicted RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 TMEM215Q68D42 235 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 RETSATQ6NUM9 610 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 C11orf63Q6NUN7 778 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 Q6ZS52 159 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 TFAP2DQ7Z6R9 452 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 METTL3Q86U44 580 aaKnown RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 RHOT1Q8IXI2 618 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 CHPFQ8IZ52 775 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 SYCE1Q8N0S2 351 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 UMODL1-AS1Q8N2C9 162 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 PYROXD2Q8N2H3 581 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 ALLCQ8N6M5 410 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 RTL3Q8N8U3 475 aaKnown RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 TXNDC5Q8NBS9 432 aaKnown RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 KCTD6Q8NC69 237 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 ACRBPQ8NEB7 543 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 TPCN2Q8NHX9 752 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 KIAA1524Q8TCG1 905 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 WFDC5Q8TCV5 224 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 HSPH1Q92598 858 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 ALG14Q96F25 216 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 PEBP4Q96S96 227 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 KCTD15Q96SI1 283 aaPredicted RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 GABRG3Q99928 467 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 MAGEB5Q9BZ81 275 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 MUC3BQ9H195 1237 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 FBRSQ9HAH7 460 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 POLMQ9NP87 494 aaPredicted RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 PRMT8Q9NR22 394 aaPredicted RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 DDX56Q9NY93 547 aaKnown RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 CWC15Q9P013 229 aaKnown RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 ZNF212Q9UDV6 495 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 VPS28Q9UK41 221 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 INTS6Q9UL03 887 aaKnown RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 HPCAL4Q9UM19 191 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 SLC8A2Q9UPR5 921 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 NEU3Q9UQ49 428 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 ARIH1Q9Y4X5 557 aaPredicted RBP6.94□□□□□ -1.3
UBBP1-201ENST00000392399 OR51B4Q9Y5P0 310 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 SNX10Q9Y5X0 201 aa6.94□□□□□ -1.3
UBBP1-201ENST00000392399 CACNA1IQ9P0X4 2223 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 ZNF318Q5VUA4 2279 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 MYO18AQ92614 2054 aaKnown RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 TARSL2A2RTX5 802 aaKnown RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 RCCD1A6NED2 376 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 ZSCAN5CA6NGD5 496 aaPredicted RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 TMEM110-MUSTN1A8MSY1 372 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 SGK1O00141 431 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 TK2O00142 265 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 PSTPIP1O43586 416 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 SPOPO43791 374 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 SYNCRIPO60506 623 aaKnown RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 RAMP2O60895 175 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 PTMAP06454 111 aaKnown RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 TCF4P15884 667 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 GOT1P17174 413 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 ERCC2P18074 760 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 COMTP21964 271 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 MZF1P28698 734 aaPredicted RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 IRAK1P51617 712 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 ARSEP51690 589 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 CDH6P55285 790 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 GEMIN4P57678 1058 aaKnown RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 CCZ1BP86790 482 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 CCZ1P86791 482 aaPredicted RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 GNA12Q03113 381 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 KRT81Q14533 505 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 STARD3Q14849 445 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 POLD3Q15054 466 aaPredicted RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 ANGPT1Q15389 498 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 CA9Q16790 459 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 SMTNL2Q2TAL5 461 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 FUT11Q495W5 492 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 EGFLAMQ63HQ2 1017 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 TXNRD3NBQ6F5E7 133 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 SERPINA13PQ6UXR4 307 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 RFX8Q6ZV50 586 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 DAAM2Q86T65 1068 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 CIR1Q86X95 450 aaPredicted RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 LRRC49Q8IUZ0 686 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 SFTPA1Q8IWL2 248 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 APCDD1Q8J025 514 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 DCAF4L2Q8NA75 395 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 CASKIN2Q8WXE0 1202 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 ARHGEF2Q92974 986 aaKnown RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 CSPG4P5Q96PW8 444 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 ZNF670Q9BS34 389 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 ACE2Q9BYF1 805 aaPredicted RBP6.93□□□□□ -1.3
UBBP1-201ENST00000392399 LACRTQ9GZZ8 138 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 TMEM245Q9H330 911 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 PCDH18Q9HCL0 1135 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 GPATCH2LQ9NWQ4 482 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 EBF1Q9UH73 591 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 DNAI1Q9UI46 699 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 SALL4Q9UJQ4 1053 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 SLC25A13Q9UJS0 675 aa6.93□□□□□ -1.3
UBBP1-201ENST00000392399 HCN2Q9UL51 889 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms