RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ARMC2Q8NEN0 867 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 FAM136AQ96C01 138 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 NPY6RQ99463 290 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 CRISPLD1Q9H336 500 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 PCDH18Q9HCL0 1135 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 FBXO6Q9NRD1 293 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 NMRK1Q9NWW6 199 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 NUDT5Q9UKK9 219 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 STAP1Q9ULZ2 295 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 AP4E1Q9UPM8 1137 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 CDY1Q9Y6F8 540 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 FCHO1O14526 889 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 COPEO14579 308 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 ADAM12O43184 909 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 MAP3K6O95382 1288 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 ATP5BP06576 529 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 MYL2P10916 166 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 ESRRAP11474 423 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 PRKCHP24723 683 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 RAP1GDS1P52306 607 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 DEUP1Q05D60 604 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 KCNT2Q6UVM3 1135 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 STRADAQ7RTN6 431 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 TAB3Q8N5C8 712 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 RAB3IL1Q8TBN0 382 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 NT5C3BQ969T7 300 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 MCUR1Q96AQ8 359 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 SRPK1Q96SB4 655 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 ZBED2Q9BTP6 218 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 PCDHB5Q9Y5E4 795 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 SLC4A7Q9Y6M7 1214 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 CHD9Q3L8U1 2897 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 TNFRSF10BO14763 440 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 MAGEC1O60732 1142 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 KRT37O76014 449 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 PSMG1O95456 288 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 SNRPAP09012 282 aaKnown RBP20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 SLC34A1Q06495 639 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 KLC1Q07866 573 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 NFE2Q16621 373 aaPredicted RBP20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 MUM1Q2TAK8 710 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 C9orf50Q5SZB4 431 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 PM20D1Q6GTS8 502 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 IRGCQ6NXR0 463 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 C1orf228Q6PIY5 440 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 VPS52Q8N1B4 723 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 HERVK_113Q902F9 699 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 FAF2Q96CS3 445 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 PRR11Q96HE9 360 aaPredicted RBP20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 IGSF21Q96ID5 467 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 SEPT5Q99719 369 aaPredicted RBP20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 USP29Q9HBJ7 922 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 STX18Q9P2W9 335 aaKnown RBP20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 PLLPQ9Y342 182 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 USP3Q9Y6I4 520 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 NLRC5Q86WI3 1866 aa20.35■□□□□ 0.85
CSNK1D-203ENST00000392334 TRIM49D1C9J1S8 452 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 NEFHP12036 1026 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 L1CAMP32004 1257 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 ELAVL2Q12926 359 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 KPNB1Q14974 876 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 RCN1Q15293 331 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 CCDC6Q16204 474 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 MGAT5BQ3V5L5 792 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 LGSNQ5TDP6 509 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 MAP7D3Q8IWC1 876 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 LRRN4Q8WUT4 740 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 LRRC39Q96DD0 335 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 ARHGEF4Q9NR80 690 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 DDIT4Q9NX09 232 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 LRCH1Q9Y2L9 728 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 OR6C75A6NL08 312 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 MDM4O15151 490 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 CAPN15O75808 1086 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 CCNHP51946 323 aaPredicted RBP20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 USP46P62068 366 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 MTM1Q13496 603 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 ZRSR2Q15696 482 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 SNX30Q5VWJ9 437 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 ATG16L1Q676U5 607 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 KIAA1841Q6NSI8 718 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 PRPF39Q86UA1 669 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 CMTR2Q8IYT2 770 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 CCDC33Q8N5R6 958 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 TEKT4Q8WW24 435 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 RNF157Q96PX1 679 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 KCTD15Q96SI1 283 aaPredicted RBP20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 IQCGQ9H095 443 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 ANLNQ9NQW6 1124 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.34■□□□□ 0.851e-8■■■■□ 20.6
CSNK1D-203ENST00000392334 MTMR10Q9NXD2 777 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 SIRPGQ9P1W8 387 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 KIAA1671Q9BY89 1806 aa20.34■□□□□ 0.85
CSNK1D-203ENST00000392334 MTMR11A4FU01 709 aa20.33■□□□□ 0.85
CSNK1D-203ENST00000392334 CAPN14A8MX76 684 aa20.33■□□□□ 0.85
CSNK1D-203ENST00000392334 VNN2O95498 520 aa20.33■□□□□ 0.85
CSNK1D-203ENST00000392334 MAGEA10P43363 369 aaPredicted RBP20.33■□□□□ 0.85
CSNK1D-203ENST00000392334 DUSP4Q13115 394 aa20.33■□□□□ 0.85
CSNK1D-203ENST00000392334 ANKS3Q6ZW76 656 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms