RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 RAB40AQ8WXH6 277 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 AKAP1Q92667 903 aaKnown RBP eCLIP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 ARHGEF2Q92974 986 aaKnown RBP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 ZKSCAN4Q969J2 545 aaPredicted RBP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 VPS33AQ96AX1 596 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 PTCD3Q96EY7 689 aaKnown RBP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 SAT2Q96F10 170 aaPredicted RBP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 VMP1Q96GC9 406 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 ZNF764Q96H86 408 aaPredicted RBP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 C1orf74Q96LT6 269 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 GPR78Q96P69 363 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 DESI2Q9BSY9 194 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 CINPQ9BW66 212 aaPredicted RBP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 NPLQ9BXD5 320 aaPredicted RBP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 NUF2Q9BZD4 464 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 OR10A4Q9H209 315 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 ZWILCHQ9H900 591 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 SCPEP1Q9HB40 452 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 MSL2Q9HCI7 577 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 ZFP64Q9NPA5 681 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 CD320Q9NPF0 282 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 AKIP1Q9NQ31 210 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 RRP7BPQ9NSQ0 103 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 C20orf141Q9NUB4 165 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 ABHD10Q9NUJ1 306 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 ARL15Q9NXU5 204 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 CPSF2Q9P2I0 782 aaKnown RBP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 UPB1Q9UBR1 384 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 HSPB7Q9UBY9 170 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 SLCO3A1Q9UIG8 710 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 B3GNT3Q9Y2A9 372 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 PTRH2Q9Y3E5 179 aaKnown RBP2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 ADAM18Q9Y3Q7 739 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 SLC30A1Q9Y6M5 507 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 DUSP10Q9Y6W6 482 aa2.03□□□□□ -2.08
SNORA48.1-201ENST00000390879 XDHP47989 1333 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 PASKQ96RG2 1323 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 A0A1W2PQM1 296 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 MARCH11A6NNE9 402 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 C16orf96A6NNT2 1141 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 C17orf100A8MU93 164 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 RNASET2O00584 256 aaKnown RBP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 CLGNO14967 610 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 DSCR3O14972 297 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 BCAT2O15382 392 aaPredicted RBP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 CYP27B1O15528 508 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 LIASO43766 372 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 STRNO43815 780 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 TMPRSS11DO60235 418 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 USP12O75317 370 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 TGDSO95455 350 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 GGPS1O95749 300 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 MBPP02686 304 aaPredicted RBP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 CHRM4P08173 479 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 C1SP09871 688 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 NR2F6P10588 404 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 KRT10P13645 584 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 EDN2P20800 178 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 MATN1P21941 496 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 COMTP21964 271 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 ITPKBP27987 946 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 POU1F1P28069 291 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 NDUFS1P28331 727 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 TYK2P29597 1187 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 CPOXP36551 454 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 BMPR1AP36894 532 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 ARL1P40616 181 aaPredicted RBP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 STAT6P42226 847 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 MTNR1AP48039 350 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 NRIP1P48552 1158 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 VPS41P49754 854 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 COPB1P53618 953 aaKnown RBP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 WDR5P61964 334 aaKnown RBP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 GPC5P78333 572 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 ITIH3Q06033 890 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 KRTAP1-1Q07627 177 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 ABHD18Q0P651 414 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 LMAN2Q12907 356 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 CAMK2DQ13557 499 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 TP53BP2Q13625 1128 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 RUNX2Q13950 521 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 SCARB2Q14108 478 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 PUM1Q14671 1186 aaKnown RBP eCLIP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 RRP1BQ14684 758 aaKnown RBP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 CNGA3Q16281 694 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 KCNA10Q16322 511 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 NTRK2Q16620 822 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 DPCR1Q3MIW9 517 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 RAB41Q5JT25 222 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 PLEKHS1Q5SXH7 462 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 ZNF618Q5T7W0 954 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 TEDDM1Q5T9Z0 273 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 LRCH2Q5VUJ6 765 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 TCERG1LQ5VWI1 586 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 SP5Q6BEB4 398 aaPredicted RBP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 KIAA0930Q6ICG6 404 aaPredicted RBP2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 GJB7Q6PEY0 223 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 TSSK4Q6SA08 328 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 SERPINA13PQ6UXR4 307 aa2.02□□□□□ -2.09
SNORA48.1-201ENST00000390879 FAM83HQ6ZRV2 1179 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms