RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 TRAF2Q12933 501 aa9.39□□□□□ -0.91
FREM1-201ENST00000380875 C11orf63Q6NUN7 778 aa9.39□□□□□ -0.91
FREM1-201ENST00000380875 ARMCX6Q7L4S7 300 aa9.39□□□□□ -0.91
FREM1-201ENST00000380875 ADCY4Q8NFM4 1077 aa9.39□□□□□ -0.91
FREM1-201ENST00000380875 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
FREM1-201ENST00000380875 DDX4Q9NQI0 724 aaKnown RBP9.39□□□□□ -0.91
FREM1-201ENST00000380875 RABGEF1Q9UJ41 708 aa9.39□□□□□ -0.91
FREM1-201ENST00000380875 NR2E1Q9Y466 385 aa9.39□□□□□ -0.91
FREM1-201ENST00000380875 ITSN1Q15811 1721 aa9.39□□□□□ -0.91
FREM1-201ENST00000380875 CDC42BPAQ5VT25 1732 aa9.39□□□□□ -0.91
FREM1-201ENST00000380875 ZNF541Q9H0D2 1346 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 TMEM191CA6NGB0 347 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 DEAF1O75398 565 aaPredicted RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 CATP04040 527 aaKnown RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 SLC6A3Q01959 620 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 KCNMB4Q86W47 210 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 TTC29Q8NA56 475 aaPredicted RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 FNDC5Q8NAU1 212 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ZSWIM2Q8NEG5 633 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 HERVK_113Q902F9 699 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 IL12RB2Q99665 862 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 FAM126AQ9BYI3 521 aaPredicted RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 AVENQ9NQS1 362 aaPredicted RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 KIAA1522Q9P206 1035 aaPredicted RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 OPTCQ9UBM4 332 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 SNX12Q9UMY4 172 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 MTO1Q9Y2Z2 717 aaKnown RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 A0A1B0GW55 424 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 SSU72P8A0A1W2PR75 194 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 FAM25AB3EWG3 89 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 FAM25CB3EWG5 89 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 FAM25GB3EWG6 89 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 H3BMM5 538 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 DUX4L2P0CJ85 424 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 DUX4L3P0CJ86 424 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 DUX4L4P0CJ87 422 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 DUX4L5P0CJ88 424 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 DUX4L6P0CJ89 424 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 DUX4L7P0CJ90 424 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 EPORP19235 508 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 RPL9P32969 192 aaKnown RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 CHRNB3Q05901 458 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 SLC25A24Q6NUK1 477 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ZNF720Q7Z2F6 126 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ADGRA1Q86SQ6 560 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ZNF248Q8NDW4 579 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 VPS33AQ96AX1 596 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 TMEM237Q96Q45 408 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 SLITRK2Q9H156 845 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 MCCC2Q9HCC0 563 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 DUX4Q9UBX2 424 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 PSME2Q9UL46 239 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ABCA6Q8N139 1617 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 LRRC72A6NJI9 287 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 TPD52L2O43399 206 aaKnown RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 SCARA3Q6AZY7 606 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 MTERF3Q96E29 417 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ZNF354BQ96LW1 612 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.38□□□□□ -0.91
FREM1-201ENST00000380875 CYLDQ9NQC7 956 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 GTF3C4Q9UKN8 822 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 GIT1Q9Y2X7 761 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ACOT9Q9Y305 439 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 SCAMP1O15126 338 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 CA12O43570 354 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 PSEN1P49768 467 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 STX4Q12846 297 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 STX5Q13190 355 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 CCNG2Q16589 344 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 CASP12Q6UXS9 341 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 ZSCAN1Q8NBB4 408 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ZNF563Q8TA94 476 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 SEMA4DQ92854 862 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 SHDQ96IW2 340 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ZSWIM1Q9BR11 485 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ZNF232Q9UNY5 417 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 C1orf232A0A0U1RR37 186 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 TM9SF1O15321 606 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 MT-CO1P00395 513 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 MMP3P08254 477 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 PDX1P52945 283 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 PRKCZQ05513 592 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ZNF470Q6ECI4 717 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 POMZP3Q6PJE2 187 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 RASGRP2Q7LDG7 609 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ATG16L2Q8NAA4 619 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 ATP6V1C2Q8NEY4 427 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 OR56A4Q8NGH8 313 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 UTP15Q8TED0 518 aaKnown RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 PROX1Q92786 737 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 C11orf84Q9BUA3 381 aaPredicted RBP9.38□□□□□ -0.91
FREM1-201ENST00000380875 NMRAL1Q9HBL8 299 aa9.38□□□□□ -0.91
FREM1-201ENST00000380875 PAICSP22234 425 aaKnown RBP9.37□□□□□ -0.91
FREM1-201ENST00000380875 MGAT1P26572 445 aa9.37□□□□□ -0.91
FREM1-201ENST00000380875 ITPKBP27987 946 aa9.37□□□□□ -0.91
FREM1-201ENST00000380875 CPA2P48052 419 aa9.37□□□□□ -0.91
FREM1-201ENST00000380875 KLC1Q07866 573 aa9.37□□□□□ -0.91
FREM1-201ENST00000380875 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms