RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TCP10LQ8TDR4 215 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 WWP1Q9H0M0 922 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 SIRT5Q9NXA8 310 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 PAQR5Q9NXK6 330 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 ENPP5Q9UJA9 477 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 SCN7AQ01118 1682 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 A0A0X1KG70 313 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 GCATO75600 419 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 DNAJB2P25686 324 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 SOX5P35711 763 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 NLRP11P59045 1033 aaKnown RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 DBPQ10586 325 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 COASYQ13057 564 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 TARDBPQ13148 414 aaKnown RBP eCLIP9.55□□□□□ -0.881e-12■■■■■ 41.8
PTPRA-204ENST00000380393 PUM3Q15397 648 aaKnown RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 NEDD8Q15843 81 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 PFKFB3Q16875 520 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 FAM214AQ32MH5 1076 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 FAM47BQ8NA70 645 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 TGFBRAP1Q8WUH2 860 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 UPF1Q92900 1129 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 KATNAL1Q9BW62 490 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 GON7Q9BXV9 100 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 DNAJC28Q9NX36 388 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 PCDH10Q9P2E7 1040 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 RIMS3Q9UJD0 308 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 DIMT1Q9UNQ2 313 aaKnown RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 CNTNAP5Q8WYK1 1306 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 ZNF831Q5JPB2 1677 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 A0A0A6YYK5 440 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 TOR1AO14656 332 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 RIMBP2O15034 1052 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 BET1O15155 118 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 BGNP21810 368 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 UQCRC1P31930 480 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 COPAP53621 1224 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 DCAF17Q5H9S7 520 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 SEL1L2Q5TEA6 688 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 STYK1Q6J9G0 422 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 TTC33Q6PID6 262 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 CARM1Q86X55 608 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 ZDHHC14Q8IZN3 488 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 TMEM35BQ8NCS4 154 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 OR8K3Q8NH51 312 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 LPGAT1Q92604 370 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 CCDC106Q9BWC9 280 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 VPS11Q9H270 941 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 KCNK4Q9NYG8 393 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 TMEM9Q9P0T7 183 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 SERPINB13Q9UIV8 391 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 PACSIN3Q9UKS6 424 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 CICQ96RK0 1608 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-204ENST00000380393 A0A0G2JMP0 313 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 C7orf72A4D263 438 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 MYMKA6NI61 221 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 FGFR2P21802 821 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 CTNNA2P26232 953 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 EPHA3P29320 983 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 ARPP19P56211 112 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 IL1RL1Q01638 556 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 TNFAIP2Q03169 654 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 TOR2AQ5JU69 321 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 RHBDF2Q6PJF5 856 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 TMPRSS9Q7Z410 1059 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 ADGRA1Q86SQ6 560 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 CCDC103Q8IW40 242 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 MCRS1Q96EZ8 462 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 SAMD11Q96NU1 681 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 MTG1Q9BT17 334 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 TMEM121Q9BTD3 319 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 EFHD1Q9BUP0 239 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 PARVAQ9NVD7 372 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 RNF103O00237 685 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 NOS1APO75052 506 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 CD4P01730 458 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 SOX11P35716 441 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 ADCY7P51828 1080 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 RCAN1P53805 252 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 TRAP1Q12931 704 aaKnown RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 BFSP2Q13515 415 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 SELPLGQ14242 412 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 ALFQ53S48 1182 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 BRDTQ58F21 947 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 ARSKQ6UWY0 536 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 KIAA0408Q6ZU52 694 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 DENND5BQ6ZUT9 1274 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 PCGF5Q86SE9 256 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 ARID3BQ8IVW6 561 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 CLYBLQ8N0X4 340 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 EID3Q8N140 333 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 FBXW8Q8N3Y1 598 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 C4orf32Q8N8J7 132 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 VANGL1Q8TAA9 524 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 SLC35G2Q8TBE7 412 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 DMRTB1Q96MA1 342 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 RMDN3Q96TC7 470 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 PKP2Q99959 881 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 PITHD1Q9GZP4 211 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 RNPEPQ9H4A4 650 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 HOMER2Q9NSB8 354 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms