RNA–Protein interactions for RNA: ENST00000379698.8

SH3KBP1-202, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH3KBP1, Length 2,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-202ENST00000379698 VPS28Q9UK41 221 aa13.32□□□□□ -0.28
SH3KBP1-202ENST00000379698 SCN4AP35499 1836 aa13.32□□□□□ -0.28
SH3KBP1-202ENST00000379698 H3BRB1 525 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 KCNK1O00180 336 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 MATN2O00339 956 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 PIRO00625 290 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 HDAC3O15379 428 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 MTSS1O43312 755 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 ZNF286BP0CG31 522 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 PIK3R1P27986 724 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 HOXA11P31270 313 aaPredicted RBP13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 ALDH1A3P47895 512 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 NPY2RP49146 381 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 MPP3Q13368 585 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 GRIK4Q16099 956 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 GLRA4Q5JXX5 417 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 GJC2Q5T442 439 aaPredicted RBP13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 ALKAL1Q6UXT8 129 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 LCA5Q86VQ0 697 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 ERO1BQ86YB8 467 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 KYQ8NBH2 561 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 RP9Q8TA86 221 aaKnown RBP13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 EMID1Q96A84 441 aaPredicted RBP13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 AGAP3Q96P47 875 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 OR52B2Q96RD2 323 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 SLC9A7Q96T83 725 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 BRD8Q9H0E9 1235 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 EPB41L1Q9H4G0 881 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 Q9H521 79 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 TUT1Q9H6E5 874 aaKnown RBP13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 ELP3Q9H9T3 547 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 ANKRD6Q9Y2G4 727 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 M0QYT0 321 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 AP1G2O75843 785 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 IREB2P48200 963 aaKnown RBP13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 NUDT2P50583 147 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 FOLH1Q04609 750 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 HSP90AA5PQ58FG0 334 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 SEL1L3Q68CR1 1132 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 TAPT1Q6NXT6 567 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 ZFP1Q6P2D0 407 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 NOTUMQ6P988 496 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 UGT2A3Q6UWM9 527 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 CATSPER4Q7RTX7 472 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 APPL2Q8NEU8 664 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 WNT8BQ93098 351 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 TSNARE1Q96NA8 513 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 AGAP2Q99490 1192 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 GORASP1Q9BQQ3 440 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 DRC3Q9H069 523 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 NSMCE4AQ9NXX6 385 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 INPP5FQ9Y2H2 1132 aa13.31□□□□□ -0.28
SH3KBP1-202ENST00000379698 SYNJ2BP-COX16A0A087WUM0 186 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 SLCO1B7G3V0H7 640 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 TXNDC9O14530 226 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 DENRO43583 198 aaKnown RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 SERPINB5P36952 375 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 RPL14P50914 215 aaKnown RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 CLCN2P51788 898 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 IRF9Q00978 393 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 LIPMQ5VYY2 423 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 KCNMB4Q86W47 210 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 MARVELD2Q8N4S9 558 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 CPSF7Q8N684 471 aaKnown RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 CATSPER1Q8NEC5 780 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 HNRNPABQ99729 332 aaKnown RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 EIF2AQ9BY44 585 aaKnown RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 DUSP16Q9BY84 665 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 CAB39LQ9H9S4 337 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 VTA1Q9NP79 307 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 TMPRSS4Q9NRS4 437 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 COX16Q9P0S2 106 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 VTI1BQ9UEU0 232 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 TRHDEQ9UKU6 1024 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 MCM3APO60318 1980 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 AP3B1O00203 1094 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 AIM2O14862 343 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 XPOTO43592 962 aaKnown RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 USP12O75317 370 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 CABYRO75952 493 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 CYP2B6P20813 491 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 GTF2A2P52657 109 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 PITX1P78337 314 aaPredicted RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 PPIDQ08752 370 aaKnown RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 PRKAA1Q13131 559 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 OLIG2Q13516 323 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 KIZQ2M2Z5 673 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 ANO4Q32M45 955 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 MARCH8Q5T0T0 291 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 RARS2Q5T160 578 aaKnown RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 KCTD11Q693B1 232 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 ITPRIPL1Q6GPH6 555 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 ZYG11AQ6WRX3 759 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 BNC2Q6ZN30 1099 aaPredicted RBP13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 SNX32Q86XE0 403 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 SHCBP1Q8NEM2 672 aa13.3□□□□□ -0.28
SH3KBP1-202ENST00000379698 KCTD13Q8WZ19 329 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms