RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 TNFSF13BQ9Y275 285 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 TPRKBQ9Y3C4 175 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 C2orf71A6NGG8 1288 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 VPS26AO75436 327 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 MAFO75444 373 aaPredicted RBP8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ZMPSTE24O75844 475 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 JCHAINP01591 159 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ARMC3Q5W041 872 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 C8orf59Q8N0T1 100 aaPredicted RBP8.92□□□□□ -0.98
PCDH9-202ENST00000377865 CPB2Q96IY4 423 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 QKIQ96PU8 341 aaKnown RBP eCLIP8.92□□□□□ -0.982e-6■■■■■ 38
PCDH9-202ENST00000377865 OSBPL6Q9BZF3 934 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 SPATA31A6Q5VVP1 1343 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 NAV1Q8NEY1 1877 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ASNA1O43681 348 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 LTA4HP09960 611 aaKnown RBP8.92□□□□□ -0.98
PCDH9-202ENST00000377865 GNAZP19086 355 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ATP6V1B2P21281 511 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ADGRE1Q14246 886 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ZNF846Q147U1 533 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 SLC35G1Q2M3R5 365 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ZC3H12AQ5D1E8 599 aaKnown RBP8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ASRGL1Q7L266 308 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 AHI1Q8N157 1196 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 CERS5Q8N5B7 392 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 RNF148Q8N7C7 305 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ATP6V0D2Q8N8Y2 350 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 APBA2Q99767 749 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 KATNAL1Q9BW62 490 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 PCDH18Q9HCL0 1135 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 ENTPD7Q9NQZ7 604 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 MYH3P11055 1940 aa8.92□□□□□ -0.98
PCDH9-202ENST00000377865 INPP4BO15327 924 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 AVILO75366 819 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 GLP2RO95838 553 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 XPAP23025 273 aaPredicted RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 ADSSP30520 456 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 IDH3AP50213 366 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 CLCN3P51790 818 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 AIF1P55008 147 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 AQP4P55087 323 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 NR1D2Q14995 579 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 HPS6Q86YV9 775 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 MICALL2Q8IY33 904 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 ZCCHC7Q8N3Z6 543 aaKnown RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 BORCS6Q96GS4 357 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PLEKHG4BQ96PX9 1271 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 THUMPD3Q9BV44 507 aaKnown RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 ACE2Q9BYF1 805 aaPredicted RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 CDHR5Q9HBB8 845 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PNPLA8Q9NP80 782 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 CASS4Q9NQ75 786 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 CCDC167Q9P0B6 97 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 SLC13A4Q9UKG4 626 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 GNEQ9Y223 722 aaKnown RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 DCAF8L1A6NGE4 600 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 CAPN8A6NHC0 703 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 TBX10O75333 385 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 GCATO75600 419 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 LINGO3P0C6S8 592 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 ODC1P11926 461 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 FGFR3P22607 806 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 RXRGP48443 463 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 LHX1P48742 406 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 CLCN5P51795 746 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 RAB10P61026 200 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 DAB2P98082 770 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 TMEM63BQ5T3F8 832 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 SMYD5Q6GMV2 418 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PCDH20Q8N6Y1 951 aaKnown RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 EFHBQ8N7U6 833 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 OR5B17Q8NGF7 314 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 JOSD2Q8TAC2 188 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PARVBQ9HBI1 364 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 DDX43Q9NXZ2 648 aaKnown RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 GALNT8Q9NY28 637 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 STK39Q9UEW8 545 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 TEKT2Q9UIF3 430 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 MYPNQ86TC9 1320 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 HOXB6P17509 224 aaKnown RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 CCNA2P20248 432 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 JAK1P23458 1154 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PEX2P28328 305 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 CDH8P55286 799 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 ARPP19P56211 112 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 NME5P56597 212 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 SLC18A2Q05940 514 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 HERC3Q15034 1050 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 ZNF772Q68DY9 489 aaPredicted RBP8.91□□□□□ -0.98
PCDH9-202ENST00000377865 TMEM26Q6ZUK4 368 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 SATL1Q86VE3 508 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 DSELQ8IZU8 1212 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PDGFCQ9NRA1 345 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 VPS45Q9NRW7 570 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 SETD4Q9NVD3 440 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 PCDHGB4Q9UN71 923 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 LRCH4O75427 683 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 MOGSQ13724 837 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 FBXO47Q5MNV8 452 aa8.91□□□□□ -0.98
PCDH9-202ENST00000377865 TTC23Q5W5X9 447 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms