RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 USP39Q53GS9 565 aaKnown RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 SEMA4AQ9H3S1 761 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 ASB8Q9H765 288 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 OPTCQ9UBM4 332 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 CES2O00748 559 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 RIPK2O43353 540 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 BUD23O43709 281 aaKnown RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 GLI1P08151 1106 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 DGKAP23743 735 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 CYP2C18P33260 490 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 SKP1P63208 163 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 DPYSL3Q14195 570 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 ILDR1Q86SU0 546 aaPredicted RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 HOMEZQ8IX15 550 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 TEX9Q8N6V9 391 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 ANKRD49Q8WVL7 239 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 FIG4Q92562 907 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.85□□□□□ -0.19
GPC6-201ENST00000377047 PLK1P53350 603 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 HJURPQ8NCD3 748 aaPredicted RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 HGH1Q9BTY7 390 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 FAM126AQ9BYI3 521 aaPredicted RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 ETNK2Q9NVF9 386 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 KLHL20Q9Y2M5 609 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 A0A088AWK7 358 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 FYNP06241 537 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 ZNF10P21506 573 aaPredicted RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 RRP1BQ14684 758 aaKnown RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 NT5DC1Q5TFE4 455 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 MTDHQ86UE4 582 aaKnown RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 ACP6Q9NPH0 428 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 SAE1Q9UBE0 346 aaPredicted RBP13.85□□□□□ -0.19
GPC6-201ENST00000377047 ASTN1O14525 1302 aa13.85□□□□□ -0.19
GPC6-201ENST00000377047 BRCC3P46736 316 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 GSTA3Q16772 222 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 ZNF697Q5TEC3 545 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 SCARA3Q6AZY7 606 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 CLYBLQ8N0X4 340 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 CXorf40BQ96DE9 158 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 TAGLN3Q9UI15 199 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 A0A087X1B8 175 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 ANKDD1BA6NHY2 528 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 ILF2Q12905 390 aaKnown RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 MAMLD1Q13495 774 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 FAM110CQ1W6H9 321 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 RIPOR1Q6ZS17 1223 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 PSTKQ8IV42 348 aaKnown RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 KATNAL2Q8IYT4 538 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 ANKRD52Q8NB46 1076 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 TRPC4APQ8TEL6 797 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 HNRNPLLQ8WVV9 542 aaKnown RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 ZBTB10Q96DT7 871 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 HSFY1Q96LI6 401 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 NXF3Q9H4D5 531 aaKnown RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 CAB39Q9Y376 341 aaPredicted RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 FARP2O94887 1054 aaPredicted RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 GABRR2P28476 465 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 SMAD3P84022 425 aaKnown RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 DYNC1I2Q13409 638 aaKnown RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 TMEM154Q6P9G4 183 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 FAM124AQ86V42 546 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 SCUBE1Q8IWY4 988 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 COLGALT2Q8IYK4 626 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 ZNF655Q8N720 491 aaPredicted RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 NAT16Q8N8M0 369 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 MAB21L3Q8N8X9 362 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 ATG16L2Q8NAA4 619 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 TPD52L3Q96J77 140 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 SLC28A3Q9HAS3 691 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 C2CD2Q9Y426 696 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 KANSL1LA0AUZ9 987 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 CYP1A1P04798 512 aaPredicted RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 EIF2S1P05198 315 aaKnown RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 SPPL2AQ8TCT8 520 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 TLE6Q9H808 572 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 CLTBP09497 229 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 OR1D2P34982 312 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 HPCAL1P37235 193 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 GRM5P41594 1212 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 ZNF143P52747 638 aaPredicted RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 IL2P60568 153 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 KLC1Q07866 573 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 HSPA14Q0VDF9 509 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 CAPRIN2Q6IMN6 1127 aaKnown RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 GET4Q7L5D6 327 aaPredicted RBP13.84□□□□□ -0.19
GPC6-201ENST00000377047 OR52K1Q8NGK4 314 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 VPS33AQ96AX1 596 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 SYT17Q9BSW7 474 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 TCF7L2Q9NQB0 619 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 COMMD8Q9NX08 183 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 GNPTGQ9UJJ9 305 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 ENTPD4Q9Y227 616 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 CCDC154A6NI56 674 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 WDR93Q6P2C0 686 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 CHPFQ8IZ52 775 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 NLGN2Q8NFZ4 835 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 MYOCQ99972 504 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 SYBUQ9NX95 663 aa13.84□□□□□ -0.19
GPC6-201ENST00000377047 TAS2R14Q9NYV8 317 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms