RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ANLNQ9NQW6 1124 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 DONSONQ9NYP3 566 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 SLCO3A1Q9UIG8 710 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 SDK1Q7Z5N4 2213 aa22.7■■□□□ 1.22
SRM-201ENST00000376957 NUP205Q92621 2012 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 ILVBLA1L0T0 632 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 TTC34A8MYJ7 566 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 SIN3BO75182 1162 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 RNF8O76064 485 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 CNTN5O94779 1100 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 GJB6O95452 261 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 SKILP12757 684 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 PBX1P40424 430 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 CTSOP43234 321 aaPredicted RBP22.69■■□□□ 1.22
SRM-201ENST00000376957 HDAC4P56524 1084 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 RPS14P62263 151 aaKnown RBP22.69■■□□□ 1.22
SRM-201ENST00000376957 DUOXA1Q1HG43 343 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 ALFQ53S48 1182 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 RETSATQ6NUM9 610 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 USP30Q70CQ3 517 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 TFAP2DQ7Z6R9 452 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 DEFB119Q8N690 84 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 DCAF4L2Q8NA75 395 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 MYO19Q96H55 970 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 OMDQ99983 421 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 GPR174Q9BXC1 333 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 MPP6Q9NZW5 540 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 EVLQ9UI08 416 aaPredicted RBP22.69■■□□□ 1.22
SRM-201ENST00000376957 HPCAL4Q9UM19 191 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 CEP192Q8TEP8 1941 aa22.69■■□□□ 1.22
SRM-201ENST00000376957 CCP110O43303 1012 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 PLEKP08567 350 aaPredicted RBP22.68■■□□□ 1.22
SRM-201ENST00000376957 C7P10643 843 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 ITPKAP23677 461 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 LIMK1P53667 647 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 RPL7AP62424 266 aaKnown RBP22.68■■□□□ 1.22
SRM-201ENST00000376957 MAMLD1Q13495 774 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 TRIM61Q5EBN2 209 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 C9orf64Q5T6V5 341 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 SH3PXD2AQ5TCZ1 1133 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 ERMP1Q7Z2K6 904 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 DGLUCYQ7Z3D6 616 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 FAM124AQ86V42 546 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 ZNF683Q8IZ20 524 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 ZNF653Q96CK0 615 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 TBC1D31Q96DN5 1066 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 XPO4Q9C0E2 1151 aaKnown RBP22.68■■□□□ 1.22
SRM-201ENST00000376957 SGK2Q9HBY8 427 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 TMPRSS4Q9NRS4 437 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 ZNHIT6Q9NWK9 470 aaKnown RBP22.68■■□□□ 1.22
SRM-201ENST00000376957 DLL3Q9NYJ7 618 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 TAS2R14Q9NYV8 317 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 CNOT8Q9UFF9 292 aaKnown RBP22.68■■□□□ 1.22
SRM-201ENST00000376957 PILRBQ9UKJ0 227 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 SNX10Q9Y5X0 201 aa22.68■■□□□ 1.22
SRM-201ENST00000376957 MUC22E2RYF6 1773 aaPredicted RBP22.68■■□□□ 1.22
SRM-201ENST00000376957 FRYLO94915 3013 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 TCRBV5S1A1TA0A578 114 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 I6L893 689 aaPredicted RBP22.67■■□□□ 1.22
SRM-201ENST00000376957 ADH1BP00325 375 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 CFIP05156 583 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 PSMA2P25787 234 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 MAPKAPK2P49137 400 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 IRAK1P51617 712 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 CLCN6P51797 869 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 ATXN3P54252 364 aaPredicted RBP22.67■■□□□ 1.22
SRM-201ENST00000376957 GFPT1Q06210 699 aaPredicted RBP22.67■■□□□ 1.22
SRM-201ENST00000376957 SLC20A2Q08357 652 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 SCAPQ12770 1279 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 NFKBIBQ15653 356 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 PPP1R15BQ5SWA1 713 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 FAM46CQ5VWP2 391 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 SPECC1LQ69YQ0 1117 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 PLEKHA7Q6IQ23 1121 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 TMC6Q7Z403 805 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 ATP11CQ8NB49 1132 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 OR8D1Q8WZ84 308 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 EPAS1Q99814 870 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 OR51B4Q9Y5P0 310 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 CFAP54Q96N23 3096 aa22.67■■□□□ 1.22
SRM-201ENST00000376957 DDX3XO00571 662 aaKnown RBP eCLIP22.66■■□□□ 1.224e-13■■■■□ 25.8
SRM-201ENST00000376957 SLC30A4O14863 429 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 ATP9BO43861 1147 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 RHOQP17081 205 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 L1CAMP32004 1257 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 RECQLP46063 649 aaPredicted RBP22.66■■□□□ 1.22
SRM-201ENST00000376957 STK19P49842 368 aaPredicted RBP22.66■■□□□ 1.22
SRM-201ENST00000376957 GEMIN4P57678 1058 aaKnown RBP22.66■■□□□ 1.22
SRM-201ENST00000376957 FOXK2Q01167 660 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 CCDC15Q0P6D6 951 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 CST6Q15828 149 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 SLC23A3Q6PIS1 610 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 MMAAQ8IVH4 418 aaKnown RBP22.66■■□□□ 1.22
SRM-201ENST00000376957 PTPRN2Q92932 1015 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 ALG14Q96F25 216 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 SPON2Q9BUD6 331 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 EDEM2Q9BV94 578 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 PABPC3Q9H361 631 aaKnown RBP22.66■■□□□ 1.22
SRM-201ENST00000376957 SMOC1Q9H4F8 434 aa22.66■■□□□ 1.22
SRM-201ENST00000376957 CATSPERBQ9H7T0 1116 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms