RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 SLC26A7Q8TE54 656 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 TMEM40Q8WWA1 233 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 CCDC124Q96CT7 223 aaKnown RBP25.84■■□□□ 1.73
C9orf40-201ENST00000376854 MED10Q9BTT4 135 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 MAN1C1Q9NR34 630 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 MAGED2Q9UNF1 606 aaPredicted RBP25.84■■□□□ 1.73
C9orf40-201ENST00000376854 ZBTB24O43167 697 aaPredicted RBP25.83■■□□□ 1.73
C9orf40-201ENST00000376854 DYNC1LI2O43237 492 aaPredicted RBP25.83■■□□□ 1.73
C9orf40-201ENST00000376854 ITGAXP20702 1163 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 AXLP30530 894 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 TPI1P60174 286 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 PEX6Q13608 980 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 CUL3Q13618 768 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 FSCBQ5H9T9 825 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 EPGNQ6UW88 154 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 FRMD7Q6ZUT3 714 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 MFSD3Q96ES6 412 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 ANLNQ9NQW6 1124 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 CENPFP49454 3210 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 SMIM35A0A1B0GVV1 85 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 FESP07332 822 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 MAP3K7CLP57077 242 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 CERCAMQ5T4B2 595 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 SLC9A7Q96T83 725 aa25.83■■□□□ 1.73
C9orf40-201ENST00000376854 E9PBE3 544 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 NRP1O14786 923 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 ATP9BO43861 1147 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 KLHL41O60662 606 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 ZNF189O75820 626 aaPredicted RBP25.82■■□□□ 1.72
C9orf40-201ENST00000376854 FYNP06241 537 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 LYNP07948 512 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 PPIDQ08752 370 aaKnown RBP25.82■■□□□ 1.72
C9orf40-201ENST00000376854 ASPHQ12797 758 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 FRG1Q14331 258 aaKnown RBP25.82■■□□□ 1.72
C9orf40-201ENST00000376854 SLC9B1Q4ZJI4 515 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 DNAH12Q6ZR08 3092 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 CLEC14AQ86T13 490 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 URGCPQ8TCY9 931 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 SREK1Q8WXA9 508 aaKnown RBP25.82■■□□□ 1.72
C9orf40-201ENST00000376854 JADE3Q92613 823 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 ABHD16BQ9H3Z7 469 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 SPATS2LQ9NUQ6 558 aaKnown RBP25.82■■□□□ 1.72
C9orf40-201ENST00000376854 PDP2Q9P2J9 529 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 RAD54BQ9Y620 910 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 TMEM114B3SHH9 223 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 ZBTB14O43829 449 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 ZMPSTE24O75844 475 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 COX4I1P13073 169 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 CYP2B6P20813 491 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 KCTD11Q693B1 232 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 NPWQ8N729 165 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 DNAJB3Q8WWF6 145 aa25.82■■□□□ 1.72
C9orf40-201ENST00000376854 I6L893 689 aaPredicted RBP25.81■■□□□ 1.72
C9orf40-201ENST00000376854 NCAM2O15394 837 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 AHCYL1O43865 530 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 C2P06681 752 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 PRDX6P30041 224 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 CD68P34810 354 aaPredicted RBP25.81■■□□□ 1.72
C9orf40-201ENST00000376854 RABGGTBP53611 331 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 AIF1P55008 147 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 TBL3Q12788 808 aaKnown RBP25.81■■□□□ 1.72
C9orf40-201ENST00000376854 SEMA3BQ13214 749 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 MPP3Q13368 585 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 UBXN11Q5T124 520 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 WSCD1Q658N2 575 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 RNF111Q6ZNA4 994 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 KCNMB4Q86W47 210 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 SPDYE1Q8NFV5 336 aaPredicted RBP25.81■■□□□ 1.72
C9orf40-201ENST00000376854 NTAN1Q96AB6 310 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 DDX50Q9BQ39 737 aaKnown RBP25.81■■□□□ 1.72
C9orf40-201ENST00000376854 MLPHQ9BV36 600 aaPredicted RBP25.81■■□□□ 1.72
C9orf40-201ENST00000376854 ULBP1Q9BZM6 244 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 GBA3Q9H227 469 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 NMRAL1Q9HBL8 299 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 WDR6Q9NNW5 1121 aaKnown RBP25.81■■□□□ 1.72
C9orf40-201ENST00000376854 C20orf96Q9NUD7 363 aaPredicted RBP25.81■■□□□ 1.72
C9orf40-201ENST00000376854 POMPQ9Y244 141 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 AMHP03971 560 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 FAM200BP0CF97 657 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 SNX17Q15036 470 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 HPS6Q86YV9 775 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 TDRD5Q8NAT2 981 aaKnown RBP25.81■■□□□ 1.72
C9orf40-201ENST00000376854 AGR3Q8TD06 166 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 PPP2R3CQ969Q6 453 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 TSPAN18Q96SJ8 248 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 APOL2Q9BQE5 337 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 SYT17Q9BSW7 474 aa25.81■■□□□ 1.72
C9orf40-201ENST00000376854 ERI2A8K979 691 aaKnown RBP25.8■■□□□ 1.72
C9orf40-201ENST00000376854 TIMM44O43615 452 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 TRIM13O60858 407 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 ZCCHC18P0CG32 403 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 SCAPQ12770 1279 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 FOXB2Q5VYV0 432 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 FBXW8Q8N3Y1 598 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 ARRDC4Q8NCT1 418 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 MAPK15Q8TD08 544 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 PIDD1Q9HB75 910 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 CHRAC1Q9NRG0 131 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 ARHGAP26Q9UNA1 814 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 ZNF638Q14966 1978 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms