RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PDE9AO76083 593 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 MCOLN2Q8IZK6 566 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 CENPTQ96BT3 561 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 FAM136AQ96C01 138 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 APBA2Q99767 749 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 DPY30Q9C005 99 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 ZMYM2Q9UBW7 1377 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 KRT6BP04259 564 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 CYP2F1P24903 491 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 KRT6CP48668 564 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 ITGA1P56199 1179 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 POLD3Q15054 466 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 NFE2Q16621 373 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 PREPLQ4J6C6 727 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 TSHZ1Q6ZSZ6 1077 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 NEK10Q6ZWH5 1172 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 STK32CQ86UX6 486 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 EXOC3L1Q86VI1 746 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 FAM131BQ86XD5 332 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 SNX32Q86XE0 403 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 EMC1Q8N766 993 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 CDRT15Q96T59 188 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 ETAA1Q9NY74 926 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 KCNK4Q9NYG8 393 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 ASTN2O75129 1339 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 ERI2A8K979 691 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 MAP2K7O14733 419 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 MSCO60682 206 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 ATP4AP20648 1035 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 CDK7P50613 346 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 FAM228AQ86W67 206 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 PCDHA3Q9Y5H8 950 aa12.5□□□□□ -0.41
NPLOC4-202ENST00000374747 HS6ST1O60243 411 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 PGAM1P18669 254 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 TTKP33981 857 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CCNG1P51959 295 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 ILF2Q12905 390 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 NECAB2Q7Z6G3 386 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 KRT73Q86Y46 540 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 RNF145Q96MT1 663 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 C1orf50Q9BV19 199 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 GRIP2Q9C0E4 1043 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 SPACA6W5XKT8 324 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 SLC2A4P14672 509 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 SSTR1P30872 391 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CAMK2GQ13555 558 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 ECM1Q16610 540 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 FAM110CQ1W6H9 321 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 SLC45A4Q5BKX6 768 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 WDR59Q6PJI9 974 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 FAM180AQ6UWF9 173 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CRELD2Q6UXH1 353 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 WDR48Q8TAF3 677 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CPNE1Q99829 537 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 ACTR8Q9H981 624 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 ANKRD6Q9Y2G4 727 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 C2CD2Q9Y426 696 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 SRRM3A6NNA2 597 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 ASS1P00966 412 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 KRT6AP02538 564 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 RARAP10276 462 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 RXRGP48443 463 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CLK2P49760 499 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 NDST1P52848 882 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 KCTD19Q17RG1 926 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 ALFQ53S48 1182 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 ZNF57Q68EA5 555 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CREG2Q8IUH2 290 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 RNF148Q8N7C7 305 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 TSEN2Q8NCE0 465 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 TRPC4APQ8TEL6 797 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 PHF21BQ96EK2 531 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 C12orf42Q96LP6 360 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 SLC25A23Q9BV35 468 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 SCUBE2Q9NQ36 999 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 GTF2A1LQ9UNN4 478 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 USP20Q9Y2K6 914 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 C15orf38-AP3S2A0A0A6YYH1 394 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 TISP43B9A030 160 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 FZD9O00144 591 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 DCXO43602 365 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 PROCP04070 461 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CRABP2P29373 138 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 PRKCIP41743 596 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 BEX3Q00994 111 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 PPP3CAQ08209 521 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CDH17Q12864 832 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 NOGQ13253 232 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 TSNQ15631 228 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 KLHL17Q6TDP4 642 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CASP12Q6UXS9 341 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 CYP2R1Q6VVX0 501 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 ARPINQ7Z6K5 226 aa12.49□□□□□ -0.41
NPLOC4-202ENST00000374747 NT5DC3Q86UY8 548 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms