RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ALDH1A2O94788 518 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 ZWINTO95229 277 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 ASMTLO95671 621 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 WDR4P57081 412 aaKnown RBP25.54■■□□□ 1.68
CTSA-203ENST00000372459 MTA1Q13330 715 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 USP33Q8TEY7 942 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 TMEM169Q96HH4 297 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 SEC16BQ96JE7 1060 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 CLSTN3Q9BQT9 956 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 CCSER2Q9H7U1 834 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 LRRC40Q9H9A6 602 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 CASS4Q9NQ75 786 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 SAMD15Q9P1V8 674 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 TCP11X1B4DZS4 312 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 CACNG3O60359 315 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 HMBSP08397 361 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 LRRC26Q2I0M4 334 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 FBXO46Q6PJ61 603 aaPredicted RBP25.53■■□□□ 1.68
CTSA-203ENST00000372459 CACNA2D3Q8IZS8 1091 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 SLC39A11Q8N1S5 342 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 CNTD1Q8N815 330 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 PDZD8Q8NEN9 1154 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 TTC17Q96AE7 1141 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 IL12RB2Q99665 862 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 PAIP2Q9BPZ3 127 aaKnown RBP25.53■■□□□ 1.68
CTSA-203ENST00000372459 BFARQ9NZS9 450 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 HSFX1Q9UBD0 423 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 IGLV3-10A0A075B6K4 115 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 TIMP1P01033 207 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 SNRPAP09012 282 aaKnown RBP25.53■■□□□ 1.68
CTSA-203ENST00000372459 PAPOLAP51003 745 aaKnown RBP25.53■■□□□ 1.68
CTSA-203ENST00000372459 NDST2P52849 883 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 FAM117BQ6P1L5 589 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 UMODL1-AS1Q8N2C9 162 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 DNAAF3Q8N9W5 541 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 OVCA2Q8WZ82 227 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 TMEM248Q9NWD8 314 aa25.53■■□□□ 1.68
CTSA-203ENST00000372459 AP3B1O00203 1094 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 FAM155BO75949 473 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 CSH1P0DML2 217 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 CSH2P0DML3 217 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 DSG1Q02413 1049 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 OLIG2Q13516 323 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 CRYMQ14894 314 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 NAPEPLDQ6IQ20 393 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 CNPY4Q8N129 248 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 ZNF276Q8N554 614 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 BANPQ8N9N5 519 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 ZNF461Q8TAF7 563 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 CDKL2Q92772 493 aa25.52■■□□□ 1.68
CTSA-203ENST00000372459 PAWRQ96IZ0 340 aaKnown RBP25.52■■□□□ 1.68
CTSA-203ENST00000372459 TGS1Q96RS0 853 aaKnown RBP25.52■■□□□ 1.68
CTSA-203ENST00000372459 RC3H2Q9HBD1 1191 aaKnown RBP25.52■■□□□ 1.68
CTSA-203ENST00000372459 AAR2Q9Y312 384 aaKnown RBP25.52■■□□□ 1.68
CTSA-203ENST00000372459 EFCAB14O75071 495 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 USP12O75317 370 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 KRT38O76015 456 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 POLBP06746 335 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 DEFB103AP81534 67 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 ANO4Q32M45 955 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 RAP1GAP2Q684P5 730 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 TPGS2Q68CL5 300 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 KLHDC8BQ8IXV7 354 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 ARMC5Q96C12 935 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 OXNAD1Q96HP4 312 aaPredicted RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 PPP1R2P1Q96PQ5 205 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 HERC2P3Q9BVR0 1158 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 HBS1LQ9Y450 684 aaKnown RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 MRPL42Q9Y6G3 142 aaKnown RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 GOLGA8RI6L899 631 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 TM9SF1O15321 606 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 ABLIM3O94929 683 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 CSF2RAP15509 400 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 LAG3P18627 525 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 SERPINB9P50453 376 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 BTG3Q14201 252 aaPredicted RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 SEPT7Q16181 437 aaKnown RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 FBXL22Q6P050 247 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 OTOP3Q7RTS5 596 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 TFAP2DQ7Z6R9 452 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 TMCO2Q7Z6W1 182 aaPredicted RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 MTBPQ96DY7 904 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 SERAC1Q96JX3 654 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 ZNF512Q96ME7 567 aaPredicted RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 FCRL5Q96RD9 977 aa25.51■■□□□ 1.67
CTSA-203ENST00000372459 KLF6Q99612 283 aaPredicted RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 IPO11Q9UI26 975 aaKnown RBP25.51■■□□□ 1.67
CTSA-203ENST00000372459 CARNS1A5YM72 827 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 TRIM49D1C9J1S8 452 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 SEC24AO95486 1093 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 ATP5C1P36542 298 aaKnown RBP25.5■■□□□ 1.67
CTSA-203ENST00000372459 NPY2RP49146 381 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 SPANXN3Q5MJ09 141 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 HHATQ5VTY9 493 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 SNX30Q5VWJ9 437 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 LINC00523Q86TU6 105 aa25.5■■□□□ 1.67
CTSA-203ENST00000372459 CMTR2Q8IYT2 770 aaKnown RBP25.5■■□□□ 1.67
CTSA-203ENST00000372459 NOL6Q9H6R4 1146 aaKnown RBP25.5■■□□□ 1.67
CTSA-203ENST00000372459 GLOD4Q9HC38 313 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms