RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 EFHBQ8N7U6 833 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 LRRN4Q8WUT4 740 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 PLEKHA8Q96JA3 519 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 KLHL32Q96NJ5 620 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 LGALS13Q9UHV8 139 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 PNMA8BQ9ULN7 279 aaPredicted RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 SQORQ9Y6N5 450 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 PTPRUQ92729 1446 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 EFCAB10A6NFE3 127 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 H3BSA7 217 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 M0QYT0 321 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 EML1O00423 815 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 SIN3BO75182 1162 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 TP53BP2Q13625 1128 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 POU6F1Q14863 301 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 TRIP4Q15650 581 aaPredicted RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 ZNF57Q68EA5 555 aaPredicted RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 HERC6Q8IVU3 1022 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 AMER2Q8N7J2 671 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 PROX1Q92786 737 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 HDHD2Q9H0R4 259 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 POMKQ9H5K3 350 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 ZDHHC18Q9NUE0 388 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 EIF3LQ9Y262 564 aaKnown RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 SNRPB2P08579 225 aaKnown RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 ZNF806P0C7X5 589 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 PCNAP12004 261 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 TKTP29401 623 aaKnown RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 ACTR3P61158 418 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 SMU1Q2TAY7 513 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 TWF2Q6IBS0 349 aaKnown RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 LRRC71Q8N4P6 559 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 DNAJB14Q8TBM8 379 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 ELMO1Q92556 727 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 APBA2Q99767 749 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 RTKNQ9BST9 563 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 SPRTNQ9H040 489 aaPredicted RBP12.91□□□□□ -0.34
GPC4-201ENST00000370828 IKZF4Q9H2S9 585 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 SMARCAD1Q9H4L7 1026 aa12.91□□□□□ -0.34
GPC4-201ENST00000370828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.91□□□□□ -0.34
GPC4-201ENST00000370828 A0A0G2JPF8 293 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 DHRS12A0PJE2 317 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 HNRNPCL3B7ZW38 293 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 KCNK1O00180 336 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 TOMM70O94826 608 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 SLITRK3O94933 977 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 HMGCRP04035 888 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 NR3C2P08235 984 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 HNRNPCL4P0DMR1 293 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 PRKACBP22694 351 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 CD151P48509 253 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 DGKKQ5KSL6 1271 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 FAM71AQ8IYT1 594 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 ARPC5LQ9BPX5 153 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
GPC4-201ENST00000370828 LIN28AQ9H9Z2 209 aaKnown RBP12.9□□□□□ -0.34
GPC4-201ENST00000370828 MID1IP1Q9NPA3 183 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 ACAT1P24752 427 aaKnown RBP12.9□□□□□ -0.34
GPC4-201ENST00000370828 AKT1P31749 480 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 DLG1Q12959 904 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 C4orf32Q8N8J7 132 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 TBCDQ9BTW9 1192 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 ACAT2Q9BWD1 397 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 TRPV5Q9NQA5 729 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 POMPQ9Y244 141 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 CCDC154A6NI56 674 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 TGDSO95455 350 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 GRIA4P48058 902 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 ACADVLP49748 655 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 SLC7A2P52569 658 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 SPP2Q13103 211 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 ATF7IP2Q5U623 682 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 CRTC3Q6UUV7 619 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 KCNT2Q6UVM3 1135 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 SPESP1Q6UW49 350 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 PCDHB18PQ96TA0 734 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
GPC4-201ENST00000370828 PLLPQ9Y342 182 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 TMEM150BA6NC51 233 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 ZNF37AP17032 561 aaPredicted RBP12.9□□□□□ -0.34
GPC4-201ENST00000370828 SLC9A3P48764 834 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 RPL7AP62424 266 aaKnown RBP12.9□□□□□ -0.34
GPC4-201ENST00000370828 EFR3AQ14156 821 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 NR6A1Q15406 480 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 FAM126BQ8IXS8 530 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 HTR3CQ8WXA8 447 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
GPC4-201ENST00000370828 TRMT13Q9NUP7 481 aaKnown RBP12.9□□□□□ -0.34
GPC4-201ENST00000370828 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
GPC4-201ENST00000370828 ANXA9O76027 345 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 ITGAVP06756 1048 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 AMHR2Q16671 573 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 CACHD1Q5VU97 1274 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 FAM45BPQ6NSW5 357 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 DSELQ8IZU8 1212 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 HAS1Q92839 578 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 CGRRF1Q99675 332 aa12.89□□□□□ -0.35
GPC4-201ENST00000370828 GPBP1L1Q9HC44 474 aaPredicted RBP12.89□□□□□ -0.35
GPC4-201ENST00000370828 ACSS2Q9NR19 701 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms