RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ILDR2Q71H61 639 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 TNS4Q8IZW8 715 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 FAM163AQ96GL9 167 aaPredicted RBP16.19■□□□□ 0.18
COL17A1-202ENST00000369733 ASB2Q96Q27 587 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 CADM1Q9BY67 442 aaKnown RBP16.19■□□□□ 0.18
COL17A1-202ENST00000369733 CDH19Q9H159 772 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 GALNT8Q9NY28 637 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 PLLPQ9Y342 182 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 NR2E1Q9Y466 385 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 UPP2O95045 317 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 TGDSO95455 350 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 PSTKQ8IV42 348 aaKnown RBP16.19■□□□□ 0.18
COL17A1-202ENST00000369733 KATNAL1Q9BW62 490 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 UBXN6Q9BZV1 441 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 PNMA8CA0A1B0GUJ8 204 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 NUMBP49757 651 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 NCF4Q15080 339 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 ZIK1Q3SY52 487 aaPredicted RBP16.19■□□□□ 0.18
COL17A1-202ENST00000369733 TTC30BQ8N4P2 665 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 OR7A2PQ8NGA2 310 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 SLC44A1Q8WWI5 657 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 PTCD3Q96EY7 689 aaKnown RBP16.19■□□□□ 0.18
COL17A1-202ENST00000369733 KREMEN1Q96MU8 473 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 MTG1Q9BT17 334 aaPredicted RBP16.19■□□□□ 0.18
COL17A1-202ENST00000369733 C12orf65Q9H3J6 166 aaKnown RBP16.19■□□□□ 0.18
COL17A1-202ENST00000369733 TIMMDC1Q9NPL8 285 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 GRHL1Q9NZI5 618 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 CHKBQ9Y259 395 aa16.19■□□□□ 0.18
COL17A1-202ENST00000369733 KATNA1O75449 491 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 CCR1P32246 355 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 GSSP48637 474 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 HPS6Q86YV9 775 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 CAPSLQ8WWF8 208 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 CCNA2P20248 432 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 MSH3P20585 1137 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 ADSSP30520 456 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 EDEM1Q92611 657 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 OMA1Q96E52 524 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 TCF12Q99081 682 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 HSD17B14Q9BPX1 270 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 ATXN3LQ9H3M9 355 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 KRT84Q9NSB2 600 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 MORF4L1Q9UBU8 362 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 DUSP12Q9UNI6 340 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 SNAP91O60641 907 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 LTFP02788 710 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 VCLP18206 1134 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 TKTP29401 623 aaKnown RBP16.18■□□□□ 0.18
COL17A1-202ENST00000369733 CHI3L1P36222 383 aaPredicted RBP16.18■□□□□ 0.18
COL17A1-202ENST00000369733 TOP3AQ13472 1001 aaPredicted RBP16.18■□□□□ 0.18
COL17A1-202ENST00000369733 ADCK2Q7Z695 626 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 IL22Q9GZX6 179 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 CLPBQ9H078 707 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 CDH22Q9UJ99 828 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 SNTNA6NMZ2 147 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 CREB1P16220 341 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 USP4Q13107 963 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 INAQ16352 499 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 RAB42Q8N4Z0 105 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 C12orf50Q8NA57 414 aaPredicted RBP16.18■□□□□ 0.18
COL17A1-202ENST00000369733 ADCY4Q8NFM4 1077 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 OR56A4Q8NGH8 313 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 NMRK2Q9NPI5 230 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 DNAJB2P25686 324 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 FASTKD3Q14CZ7 662 aaKnown RBP16.18■□□□□ 0.18
COL17A1-202ENST00000369733 LLGL2Q6P1M3 1020 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 DNAJC14Q6Y2X3 702 aaPredicted RBP16.18■□□□□ 0.18
COL17A1-202ENST00000369733 FAM183BPQ6ZVS7 135 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 PALB2Q86YC2 1186 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 SFRP1Q8N474 314 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 ABHD8Q96I13 439 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 ZBED2Q9BTP6 218 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 ASB7Q9H672 318 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 SCUBE2Q9NQ36 999 aa16.18■□□□□ 0.18
COL17A1-202ENST00000369733 CYBBP04839 570 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 BACE1P56817 501 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 TNK2Q07912 1038 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 MAD2L1Q13257 205 aaPredicted RBP16.17■□□□□ 0.18
COL17A1-202ENST00000369733 LPIN1Q14693 890 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 RFWD3Q6PCD5 774 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 METTL7BQ6UX53 244 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 LRRN4Q8WUT4 740 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 SNRNP25Q9BV90 132 aaKnown RBP16.17■□□□□ 0.18
COL17A1-202ENST00000369733 ACE2Q9BYF1 805 aaPredicted RBP16.17■□□□□ 0.18
COL17A1-202ENST00000369733 LBPP18428 481 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 CDH3P22223 829 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 HIRAP54198 1017 aaPredicted RBP16.17■□□□□ 0.18
COL17A1-202ENST00000369733 EPS8Q12929 822 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 C1DQ13901 141 aaKnown RBP16.17■□□□□ 0.18
COL17A1-202ENST00000369733 MARC1Q5VT66 337 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 ZBTB46Q86UZ6 589 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 MIB1Q86YT6 1006 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 ADAM32Q8TC27 787 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 C7orf26Q96N11 449 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 VAT1Q99536 393 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 TTC23Q5W5X9 447 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 SNX15Q9NRS6 342 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 ACKR2O00590 384 aa16.17■□□□□ 0.18
COL17A1-202ENST00000369733 ASMTLO95671 621 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms